Os02g0259900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0259900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 315.01 | 0.834 | 6.68 | 4.04 | 2.35 | 3.42 | -0.21 | 3.92 | 1.05 | 9.64 | 23.11 | 4 | -- | -- |
| 323.01 | 0.837 | 6.74 | 3.46 | 2.34 | 3.74 | 0.268 | -- | 0.901 | 9.51 | 23.56 | 3 | -- | -- |
| 314.59 | 0.826 | 6.69 | 4 | 2.35 | 3.43 | -- | 3.71 | 1.04 | 9.62 | 23.2 | 3 | -- | -- |
| 323.3 | 0.837 | 6.74 | 3.47 | 2.34 | 3.75 | -- | -- | 0.9 | 9.51 | 23.58 | 3 | -- | -- |
| 616.37 | 1.16 | 6.78 | 3.91 | -- | 4.31 | -- | 4.15 | 0.865 | -- | 20.7 | 2 | -- | -- |
| 543.06 | 1.09 | 6.63 | 4.1 | 3.02 | -- | 0.999 | -- | 1.41 | 11.5 | -- | -- | -- | -- |
| 547.34 | 1.1 | 6.63 | 4.14 | 3.02 | -- | -- | -- | 1.41 | 11.5 | -- | -- | -- | -- |
| 627.21 | 1.17 | 6.86 | 3.23 | -- | 4.48 | -- | -- | 0.694 | -- | 22 | 2 | -- | -- |
| 617.43 | 1.16 | 6.87 | -- | 2.25 | 4.71 | -- | -- | 0.338 | 8.86 | 22.59 | 3 | -- | -- |
| 1118.5 | 1.56 | 6.7 | 4.06 | -- | -- | -- | -- | 1.38 | -- | -- | -- | -- | -- |
| 998.32 | 1.48 | 6.73 | -- | 2.97 | -- | -- | -- | 0.949 | 11.4 | -- | -- | -- | -- |
| 887.7 | 1.39 | 6.96 | -- | -- | 5.18 | -- | -- | 0.211 | -- | 20.97 | 2 | -- | -- |
| 1552.52 | 1.84 | 6.8 | -- | -- | -- | -- | -- | 0.928 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 300.57 | temperature | 20 | 10 | > th | dose dependent | sin | 2 | NA |
| 2 | 301.10 | temperature | 10 | 10 | > th | dose dependent | sin | 2 | NA |
| 15 | 312.27 | temperature | 30 | 10 | < th | dose dependent | sin | 2 | NA |
| 53 | 325.76 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 21 |
| 61 | 328.00 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 18 |
| 79 | 330.74 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 18 |
| 84 | 331.35 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 97 | 334.04 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 98 | 334.11 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 100 | 334.26 | temperature | 25 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 102 | 334.80 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 132 | 336.79 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 145 | 337.32 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 16 |
| 252 | 344.30 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 5 |
| 280 | 344.99 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 22 |
| 288 | 345.57 | temperature | 25 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 344 | 348.53 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 345 | 348.60 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 348 | 348.84 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 362 | 350.18 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 378 | 351.15 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 16 |
| 381 | 351.33 | temperature | 25 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 387 | 351.48 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 399 | 352.31 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 425 | 353.11 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 435 | 353.83 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 453 | 354.63 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 454 | 354.65 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 467 | 355.31 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 468 | 355.35 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 481 | 356.20 | temperature | 25 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 504 | 357.26 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 18 |
| 577 | 360.70 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 706 | 365.73 | temperature | 25 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 740 | 366.32 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 19 |
| 752 | 366.73 | temperature | 20 | 720 | > th | dose dependent | rect. | 22 | 15 |
| 770 | 367.15 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 827 | 368.64 | temperature | 25 | 10 | > th | dose dependent | rect. | 5 | 11 |
| 833 | 368.82 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 15 |
| 947 | 371.13 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 962 | 371.54 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 16 |