Os02g0256200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0256200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 176.29 | 0.624 | 7.15 | 0.151 | 1.24 | 3.76 | 0.406 | 5.2 | 0.726 | 21.6 | 1.059 | 7219 | -- | -- |
| 203.9 | 0.665 | 7.12 | 1.09 | 1.28 | 3.02 | 0.153 | -- | 0.823 | 21.7 | 1.234 | 7210 | -- | -- |
| 176.88 | 0.619 | 7.15 | 0.134 | 1.23 | 3.77 | -- | 5.21 | 0.725 | 21.7 | 1.053 | 7220 | -- | -- |
| 185.63 | 0.635 | 7.12 | 1.42 | 1.26 | 2.77 | -- | -- | 0.897 | 21.5 | 1.232 | 12985 | -- | -- |
| 246.84 | 0.732 | 7.1 | 0.289 | -- | 4.06 | -- | 4.93 | 0.775 | -- | 1.06 | 7331 | -- | -- |
| 362.73 | 0.893 | 7.22 | 0.471 | 1.24 | -- | 0.402 | -- | 0.186 | 21.4 | -- | -- | -- | -- |
| 363.29 | 0.893 | 7.22 | 0.456 | 1.24 | -- | -- | -- | 0.185 | 21.4 | -- | -- | -- | -- |
| 251.72 | 0.739 | 7.09 | 1.21 | -- | 2.9 | -- | -- | 0.913 | -- | 1.498 | 14595 | -- | -- |
| 218.88 | 0.689 | 7.13 | -- | 1.47 | 2.36 | -- | -- | 0.911 | 21.4 | 2.13 | 15625 | -- | -- |
| 453.62 | 0.995 | 7.19 | 0.463 | -- | -- | -- | -- | 0.181 | -- | -- | -- | -- | -- |
| 368.76 | 0.898 | 7.23 | -- | 1.24 | -- | -- | -- | 0.134 | 21.5 | -- | -- | -- | -- |
| 293.93 | 0.798 | 7.08 | -- | -- | 2.42 | -- | -- | 0.791 | -- | 2.201 | 16064 | -- | -- |
| 459.28 | 1 | 7.2 | -- | -- | -- | -- | -- | 0.13 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 157.83 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 2 | 158.05 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 6 | 158.55 | radiation | 1 | 14400 | < th | dose independent | rect. | 15 | 16 |
| 16 | 159.12 | radiation | 1 | 14400 | < th | dose independent | sin | 11 | NA |
| 19 | 159.16 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 23 | 159.24 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 24 | 159.25 | radiation | 1 | 14400 | > th | dose independent | sin | 12 | NA |
| 31 | 159.51 | radiation | 1 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 34 | 159.54 | radiation | 1 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 118 | 160.45 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 23 |
| 122 | 160.50 | radiation | 1 | 14400 | < th | dose independent | rect. | 1 | 17 |
| 124 | 160.51 | radiation | 1 | 14400 | < th | dose independent | rect. | 3 | 15 |
| 129 | 160.51 | radiation | 1 | 14400 | < th | dose independent | rect. | 19 | 23 |
| 136 | 160.58 | radiation | 1 | 14400 | < th | dose independent | rect. | 1 | 20 |
| 139 | 160.59 | radiation | 1 | 14400 | < th | dose independent | rect. | 3 | 18 |
| 158 | 160.61 | radiation | 1 | 14400 | < th | dose independent | no | NA | NA |
| 167 | 160.61 | radiation | 1 | 14400 | < th | dose independent | rect. | 3 | 23 |
| 191 | 160.71 | radiation | 1 | 14400 | > th | dose independent | rect. | 14 | 22 |
| 232 | 160.94 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 23 |
| 237 | 161.02 | radiation | 1 | 14400 | > th | dose independent | no | NA | NA |
| 238 | 161.02 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 15 |
| 330 | 161.82 | radiation | 1 | 14400 | < th | dose independent | sin | 2 | NA |
| 358 | 162.32 | radiation | 1 | 14400 | > th | dose independent | sin | 2 | NA |
| 505 | 163.94 | radiation | 1 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 554 | 164.42 | radiation | 1 | 14400 | < th | dose independent | rect. | 15 | 5 |
| 558 | 164.44 | radiation | 1 | 14400 | < th | dose independent | rect. | 15 | 11 |
| 591 | 164.51 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 686 | 165.00 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 710 | 165.17 | temperature | 25 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 714 | 165.20 | radiation | 1 | 14400 | > th | dose independent | rect. | 10 | 9 |
| 788 | 165.47 | radiation | 1 | 14400 | < th | dose independent | rect. | 9 | 12 |
| 793 | 165.49 | humidity | 90 | 43200 | > th | dose independent | rect. | 6 | 10 |
| 794 | 165.49 | radiation | 1 | 14400 | < th | dose independent | rect. | 9 | 17 |
| 821 | 165.59 | humidity | 90 | 43200 | > th | dose dependent | rect. | 6 | 11 |
| 825 | 165.66 | humidity | 90 | 43200 | > th | dose dependent | rect. | 6 | 13 |
| 826 | 165.66 | humidity | 90 | 43200 | > th | dose dependent | rect. | 6 | 16 |
| 839 | 165.79 | radiation | 1 | 14400 | < th | dose dependent | rect. | 15 | 15 |
| 840 | 165.80 | humidity | 90 | 43200 | > th | dose independent | rect. | 6 | 13 |
| 870 | 166.13 | humidity | 90 | 43200 | < th | dose independent | rect. | 4 | 15 |
| 874 | 166.16 | humidity | 90 | 43200 | > th | dose dependent | sin | 22 | NA |
| 877 | 166.21 | humidity | 90 | 43200 | > th | dose independent | sin | 0 | NA |
| 885 | 166.36 | humidity | 90 | 43200 | < th | dose independent | sin | 0 | NA |
| 909 | 166.49 | radiation | 1 | 14400 | < th | dose dependent | rect. | 3 | 3 |
| 911 | 166.51 | humidity | 90 | 43200 | < th | dose independent | rect. | 6 | 16 |
| 939 | 166.72 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 11 |
| 944 | 166.75 | radiation | 1 | 14400 | < th | dose dependent | rect. | 21 | 9 |
| 954 | 166.87 | temperature | 25 | 43200 | < th | dose dependent | rect. | 13 | 6 |
| 988 | 167.12 | temperature | 10 | 43200 | > th | dose dependent | rect. | 17 | 1 |