Os02g0256000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0256000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 120.63 | 0.516 | 5.88 | 1.01 | 0.713 | -2.03 | 0.408 | -0.499 | 0.386 | 2.45 | 20.8 | 22 | -- | -- |
| 120.8 | 0.512 | 5.88 | 0.997 | 0.703 | -1.9 | 0.35 | -- | 0.383 | 2.43 | 20.8 | 21 | -- | -- |
| 121.15 | 0.513 | 5.88 | 0.989 | 0.711 | -1.95 | -- | -0.188 | 0.38 | 2.47 | 20.8 | 21 | -- | -- |
| 121.18 | 0.513 | 5.88 | 0.981 | 0.705 | -1.9 | -- | -- | 0.38 | 2.47 | 20.8 | 21 | -- | -- |
| 148.23 | 0.567 | 5.87 | 1.06 | -- | -1.93 | -- | -0.024 | 0.45 | -- | 19.46 | 50 | -- | -- |
| 148.08 | 0.57 | 5.85 | 1.31 | 0.558 | -- | 0.405 | -- | 0.529 | 2.77 | -- | -- | -- | -- |
| 148.64 | 0.571 | 5.85 | 1.3 | 0.561 | -- | -- | -- | 0.527 | 2.86 | -- | -- | -- | -- |
| 145.71 | 0.562 | 5.88 | 0.955 | -- | -1.72 | -- | -- | 0.381 | -- | 20.35 | 493 | -- | -- |
| 141.88 | 0.555 | 5.91 | -- | 0.755 | -2.48 | -- | -- | 0.243 | 2.71 | 20.95 | 205 | -- | -- |
| 166.83 | 0.604 | 5.84 | 1.32 | -- | -- | -- | -- | 0.541 | -- | -- | -- | -- | -- |
| 192.94 | 0.65 | 5.88 | -- | 0.587 | -- | -- | -- | 0.382 | 2.87 | -- | -- | -- | -- |
| 161.93 | 0.593 | 5.93 | -- | -- | -1.85 | -- | -- | 0.176 | -- | 20.66 | 2494 | -- | -- |
| 212.83 | 0.681 | 5.88 | -- | -- | -- | -- | -- | 0.395 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 117.50 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 2 | 118.34 | temperature | 20.0 | 30 | < th | dose dependent | sin | 7 | NA |
| 4 | 118.66 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 5 | 118.71 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 9 |
| 6 | 118.71 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 9 |
| 10 | 118.89 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 8 | 12 |
| 12 | 119.33 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 10 |
| 16 | 119.44 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 21 | 15 |
| 18 | 119.47 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 8 | 4 |
| 22 | 119.56 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 9 | 10 |
| 26 | 119.60 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 8 |
| 48 | 119.94 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 53 | 119.97 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 6 |
| 64 | 120.06 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 75 | 120.16 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 6 |
| 78 | 120.22 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 7 | 7 |
| 79 | 120.23 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 85 | 120.30 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 8 |
| 97 | 120.41 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 98 | 120.41 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 8 |
| 100 | 120.41 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 8 |
| 103 | 120.45 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 105 | 120.48 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 125 | 120.61 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 19 | 2 |
| 138 | 120.65 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 139 | 120.65 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 2 |
| 142 | 120.68 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 7 | 8 |
| 146 | 120.72 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 7 | 10 |
| 153 | 120.79 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 161 | 120.83 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 164 | 120.86 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 6 |
| 166 | 120.87 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 188 | 121.01 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 14 |
| 190 | 121.04 | temperature | 20.0 | 270 | < th | dose dependent | sin | 10 | NA |
| 192 | 121.05 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 195 | 121.07 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 8 |
| 207 | 121.11 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 208 | 121.12 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 23 | 12 |
| 213 | 121.17 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 7 |
| 217 | 121.19 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 6 |
| 218 | 121.19 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 6 |
| 221 | 121.21 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 228 | 121.27 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 8 |
| 232 | 121.28 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 5 |
| 238 | 121.32 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 9 | 20 |
| 240 | 121.34 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 255 | 121.42 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 271 | 121.48 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 18 | 18 |
| 303 | 121.59 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 16 | 20 |
| 335 | 121.70 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 9 | 21 |
| 355 | 121.72 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 432 | 121.88 | temperature | 20.0 | 30 | < th | dose dependent | no | NA | NA |
| 445 | 121.89 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 446 | 121.89 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 459 | 121.92 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 463 | 121.94 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 469 | 121.96 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 4 |
| 501 | 122.01 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 506 | 122.03 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 4 | 12 |
| 507 | 122.03 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 4 | 12 |
| 510 | 122.03 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 4 | 12 |
| 532 | 122.13 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 541 | 122.17 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 656 | 122.46 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 657 | 122.46 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 22 | NA |
| 707 | 122.61 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 717 | 122.63 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 735 | 122.67 | wind | 9.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 736 | 122.67 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 24 | 17 |
| 738 | 122.67 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 24 | 17 |
| 739 | 122.68 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 784 | 122.82 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 840 | 122.97 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 24 | 17 |
| 849 | 122.98 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 6 | 14 |
| 851 | 122.99 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 932 | 123.18 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 957 | 123.24 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 21 | 9 |
| 1000 | 123.32 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 6 | 14 |