Os02g0255900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0255900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 188.91 | 0.646 | 4.28 | -1.23 | 0.619 | 1.29 | -0.0581 | 1.36 | -0.528 | 22.4 | 20.18 | 3806 | -- | -- |
| 191.31 | 0.644 | 4.32 | -1.34 | 0.625 | 1.03 | -0.195 | -- | -0.541 | 22.2 | 20.7 | 3672 | -- | -- |
| 188.93 | 0.64 | 4.28 | -1.23 | 0.619 | 1.29 | -- | 1.35 | -0.528 | 22.4 | 20.19 | 3797 | -- | -- |
| 190.58 | 0.643 | 4.33 | -1.42 | 0.624 | 0.999 | -- | -- | -0.59 | 22.4 | 20.69 | 3793 | -- | -- |
| 212.12 | 0.678 | 4.26 | -1.24 | -- | 1.38 | -- | 1.45 | -0.548 | -- | 20.2 | 3771 | -- | -- |
| 211.06 | 0.681 | 4.27 | -0.822 | 0.669 | -- | 0.0553 | -- | -0.296 | 22.6 | -- | -- | -- | -- |
| 211.07 | 0.68 | 4.27 | -0.824 | 0.669 | -- | -- | -- | -0.296 | 22.6 | -- | -- | -- | -- |
| 214.29 | 0.682 | 4.33 | -1.46 | -- | 1.08 | -- | -- | -0.626 | -- | 20.8 | 3736 | -- | -- |
| 225.12 | 0.699 | 4.25 | -- | 0.621 | 0.307 | -- | -- | -0.254 | 22.4 | 26.8 | 2829 | -- | -- |
| 238.58 | 0.722 | 4.25 | -0.812 | -- | -- | -- | -- | -0.293 | -- | -- | -- | -- | -- |
| 228.97 | 0.708 | 4.25 | -- | 0.664 | -- | -- | -- | -0.204 | 22.5 | -- | -- | -- | -- |
| 245.49 | 0.73 | 4.26 | -- | -- | 0.53 | -- | -- | -0.349 | -- | 25.6 | 2218 | -- | -- |
| 255.97 | 0.747 | 4.23 | -- | -- | -- | -- | -- | -0.203 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 186.32 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 3 | 186.70 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 44 | 188.10 | temperature | 20 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 89 | 188.87 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |
| 110 | 189.05 | temperature | 20 | 4320 | < th | dose independent | sin | 15 | NA |
| 132 | 189.23 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 2 |
| 157 | 189.41 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 1 |
| 165 | 189.45 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 194 | 189.62 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 199 | 189.65 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 4 |
| 310 | 190.15 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 18 |
| 335 | 190.25 | temperature | 20 | 720 | > th | dose independent | rect. | 16 | 19 |
| 427 | 190.55 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 677 | 191.10 | temperature | 20 | 4320 | > th | dose independent | rect. | 5 | 21 |
| 841 | 191.38 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 18 |
| 853 | 191.40 | temperature | 20 | 4320 | < th | dose independent | rect. | 6 | 21 |
| 871 | 191.41 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 11 |
| 895 | 191.46 | temperature | 20 | 4320 | > th | dose independent | no | NA | NA |