Os02g0255700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0255700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.85 | 0.406 | 13.2 | 0.0553 | 1.01 | 0.623 | 0.603 | 1.6 | -0.225 | 21.8 | 8.257 | 71 | -- | -- |
| 77.63 | 0.41 | 13.1 | 0.0623 | 0.987 | 0.513 | -0.0863 | -- | -0.216 | 21.7 | 5.413 | 55 | -- | -- |
| 75.81 | 0.406 | 13.2 | 0.0765 | 0.976 | 0.559 | -- | 1.29 | -0.213 | 21.7 | 8.706 | 106 | -- | -- |
| 77.65 | 0.41 | 13.1 | 0.0653 | 0.994 | 0.532 | -- | -- | -0.219 | 21.8 | 5.179 | 55 | -- | -- |
| 94.05 | 0.452 | 13.2 | 0.00328 | -- | 0.858 | -- | -0.425 | -0.297 | -- | -18.01 | 912 | -- | -- |
| 81.41 | 0.423 | 13.1 | 0.0739 | 0.815 | -- | -0.0617 | -- | -0.202 | 20.9 | -- | -- | -- | -- |
| 81.42 | 0.423 | 13.1 | 0.076 | 0.815 | -- | -- | -- | -0.202 | 20.9 | -- | -- | -- | -- |
| 94.15 | 0.452 | 13.1 | 0.00761 | -- | 0.842 | -- | -- | -0.308 | -- | -22.16 | 912 | -- | -- |
| 77.79 | 0.411 | 13.2 | -- | 0.995 | 0.537 | -- | -- | -0.226 | 21.7 | 5.274 | 59 | -- | -- |
| 119.36 | 0.511 | 13.1 | 0.076 | -- | -- | -- | -- | -0.208 | -- | -- | -- | -- | -- |
| 81.57 | 0.422 | 13.1 | -- | 0.815 | -- | -- | -- | -0.211 | 20.9 | -- | -- | -- | -- |
| 94.15 | 0.452 | 13.1 | -- | -- | 0.842 | -- | -- | -0.309 | -- | -19.5 | 912 | -- | -- |
| 119.51 | 0.51 | 13.1 | -- | -- | -- | -- | -- | -0.216 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 69.03 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 15 |
| 5 | 69.39 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 7 | 4 |
| 7 | 69.41 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 7 | 8 |
| 24 | 70.12 | temperature | 10.0 | 90 | > th | dose dependent | sin | 4 | NA |
| 44 | 70.34 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 14 |
| 56 | 70.51 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 8 | 7 |
| 65 | 70.64 | temperature | 30.0 | 90 | < th | dose dependent | sin | 3 | NA |
| 97 | 70.96 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 101 | 71.00 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 108 | 71.08 | radiation | 40.0 | 270 | < th | dose independent | rect. | 10 | 21 |
| 138 | 71.30 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 164 | 71.50 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 4 |
| 195 | 71.72 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 8 | 4 |
| 236 | 71.97 | wind | 1.0 | 14400 | > th | dose independent | rect. | 9 | 3 |
| 250 | 72.03 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 267 | 72.11 | wind | 1.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 295 | 72.22 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 296 | 72.22 | temperature | 25.0 | 270 | > th | dose independent | rect. | 22 | 14 |
| 309 | 72.27 | wind | 1.0 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 311 | 72.27 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 315 | 72.28 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 321 | 72.30 | temperature | 25.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 322 | 72.30 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 9 | 9 |
| 351 | 72.38 | radiation | 1.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 362 | 72.41 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 388 | 72.48 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 12 |
| 408 | 72.52 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 23 |
| 409 | 72.52 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 6 | 5 |
| 421 | 72.54 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 14 |
| 450 | 72.59 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 463 | 72.61 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 10 |
| 479 | 72.63 | radiation | 30.0 | 10 | < th | dose independent | rect. | 12 | 20 |
| 483 | 72.64 | temperature | 15.0 | 90 | > th | dose independent | rect. | 7 | 22 |
| 498 | 72.67 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 4 | 17 |
| 502 | 72.68 | temperature | 25.0 | 270 | > th | dose independent | sin | 6 | NA |
| 503 | 72.68 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 519 | 72.72 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 525 | 72.73 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 526 | 72.73 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 529 | 72.73 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 2 | 12 |
| 554 | 72.77 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 578 | 72.81 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 8 | 20 |
| 585 | 72.83 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 2 | 6 |
| 602 | 72.86 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 9 |
| 625 | 72.90 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 4 | 4 |
| 628 | 72.91 | wind | 1.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 636 | 72.91 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 13 |
| 655 | 72.94 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 669 | 72.97 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 680 | 72.99 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 682 | 72.99 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 683 | 72.99 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 686 | 72.99 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 687 | 72.99 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 688 | 72.99 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 692 | 72.99 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 700 | 72.99 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 708 | 73.00 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 9 | 7 |
| 751 | 73.07 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 8 | 7 |
| 759 | 73.08 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 7 | 4 |
| 772 | 73.10 | temperature | 25.0 | 10 | > th | dose independent | rect. | 8 | 4 |
| 788 | 73.12 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 8 | 7 |
| 793 | 73.13 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 821 | 73.16 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 6 |
| 827 | 73.16 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 880 | 73.19 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 882 | 73.19 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 883 | 73.19 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 885 | 73.19 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 886 | 73.19 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 887 | 73.19 | radiation | 30.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 889 | 73.19 | radiation | 10.0 | 90 | < th | dose independent | rect. | 4 | 14 |
| 890 | 73.19 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 892 | 73.19 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 902 | 73.20 | radiation | 10.0 | 90 | < th | dose independent | rect. | 4 | 18 |
| 935 | 73.24 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 2 | 17 |
| 944 | 73.25 | radiation | 1.0 | 90 | > th | dose independent | rect. | 17 | 14 |
| 992 | 73.28 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 993 | 73.28 | radiation | 10.0 | 10 | < th | dose independent | rect. | 4 | 18 |
| 995 | 73.28 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |