Os02g0253300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF247, plant family protein.
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Os02g0253300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF247, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.42 | 0.34 | 9.55 | 1.11 | 0.38 | -0.405 | 0.718 | 5.14 | -0.198 | 22.9 | 25.4 | 3933 | -- | -- |
| 56.23 | 0.349 | 9.73 | -0.16 | 0.361 | 0.346 | 0.877 | -- | -0.615 | 22.9 | 30.9 | 18803 | -- | -- |
| 54.5 | 0.344 | 9.55 | 1.14 | 0.374 | -0.428 | -- | 5.44 | -0.193 | 23.1 | 25.47 | 3896 | -- | -- |
| 59.23 | 0.358 | 9.73 | -0.171 | 0.349 | 0.331 | -- | -- | -0.59 | 23.3 | 31.2 | 18762 | -- | -- |
| 63.12 | 0.37 | 9.53 | 1.2 | -- | -0.433 | -- | 6.03 | -0.196 | -- | 26.2 | 3946 | -- | -- |
| 59.5 | 0.362 | 9.7 | -0.0189 | 0.37 | -- | 0.863 | -- | -0.438 | 23 | -- | -- | -- | -- |
| 62.59 | 0.37 | 9.7 | -0.0553 | 0.366 | -- | -- | -- | -0.441 | 23.4 | -- | -- | -- | -- |
| 66.8 | 0.381 | 9.73 | -0.217 | -- | 0.417 | -- | -- | -0.622 | -- | 31.1 | 19553 | -- | -- |
| 60.07 | 0.361 | 9.72 | -- | 0.355 | 0.285 | -- | -- | -0.549 | 23.3 | 31.2 | 18738 | -- | -- |
| 71 | 0.394 | 9.69 | -0.0458 | -- | -- | -- | -- | -0.438 | -- | -- | -- | -- | -- |
| 62.67 | 0.37 | 9.7 | -- | 0.366 | -- | -- | -- | -0.435 | 23.4 | -- | -- | -- | -- |
| 67.76 | 0.383 | 9.72 | -- | -- | 0.331 | -- | -- | -0.559 | -- | 32.1 | 18315 | -- | -- |
| 71.06 | 0.393 | 9.69 | -- | -- | -- | -- | -- | -0.433 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.50 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 2 | 48.77 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 3 | 48.92 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 8 |
| 4 | 48.98 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 5 | 48.99 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 9 | 49.13 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 13 | 49.25 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 14 | 18 |
| 22 | 49.48 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 27 | 49.54 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 5 |
| 31 | 49.62 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 35 | 49.65 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 24 | 7 |
| 39 | 49.70 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 41 | 49.70 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 18 | 2 |
| 46 | 49.77 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 47 | 49.77 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 49 | 49.82 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 54 | 49.86 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 56 | 49.87 | wind | 1.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 61 | 49.90 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 6 |
| 66 | 49.94 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 72 | 49.96 | wind | 1.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 73 | 49.96 | wind | 1.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 74 | 49.98 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 6 |
| 77 | 49.99 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 3 |
| 81 | 50.00 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 86 | 50.02 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 2 |
| 88 | 50.04 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 94 | 50.07 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 96 | 50.07 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 99 | 50.10 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 3 |
| 101 | 50.10 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 3 |
| 103 | 50.11 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 14 | 10 |
| 105 | 50.12 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 14 | 5 |
| 118 | 50.13 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 19 | 10 |
| 119 | 50.14 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 14 | 3 |
| 122 | 50.15 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 14 | 13 |
| 127 | 50.16 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 6 |
| 130 | 50.16 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 14 | 15 |
| 133 | 50.16 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 6 |
| 143 | 50.22 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 149 | 50.23 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 150 | 50.23 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 154 | 50.23 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 8 |
| 156 | 50.24 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 179 | 50.30 | humidity | 90.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 187 | 50.32 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 6 | 5 |
| 200 | 50.32 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 211 | 50.34 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 8 | NA |
| 225 | 50.37 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 246 | 50.41 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 254 | 50.43 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 3 |
| 273 | 50.47 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 299 | 50.51 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 317 | 50.52 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 328 | 50.54 | radiation | 10.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 336 | 50.54 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 12 | 7 |
| 356 | 50.57 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 5 |
| 367 | 50.59 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 395 | 50.64 | wind | 3.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 414 | 50.65 | radiation | 30.0 | 4320 | > th | dose dependent | rect. | 14 | 18 |
| 431 | 50.68 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 433 | 50.69 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 457 | 50.72 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 463 | 50.73 | radiation | 30.0 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 484 | 50.75 | radiation | 40.0 | 4320 | < th | dose independent | sin | 13 | NA |
| 485 | 50.75 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 491 | 50.75 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 492 | 50.75 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 504 | 50.77 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 525 | 50.80 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 536 | 50.81 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 546 | 50.82 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 550 | 50.83 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 551 | 50.83 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 566 | 50.83 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 15 |
| 587 | 50.86 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 619 | 50.88 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 627 | 50.89 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 629 | 50.89 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 637 | 50.90 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 642 | 50.91 | wind | 3.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 660 | 50.93 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 664 | 50.93 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 669 | 50.94 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 683 | 50.95 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 687 | 50.95 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 9 | 5 |
| 702 | 50.97 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 18 | NA |
| 740 | 51.00 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 749 | 51.01 | wind | 1.0 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 757 | 51.02 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 5 |
| 773 | 51.03 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 775 | 51.03 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 781 | 51.04 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 811 | 51.05 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 836 | 51.07 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 844 | 51.07 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 850 | 51.08 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 854 | 51.08 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 5 |
| 882 | 51.09 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 899 | 51.11 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 932 | 51.14 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 936 | 51.14 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 951 | 51.15 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 953 | 51.15 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 964 | 51.16 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 972 | 51.16 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 974 | 51.16 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 3 |
| 978 | 51.16 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 17 |
| 981 | 51.17 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 985 | 51.17 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 10 | 4 |