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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0250400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to GDSL-motif lipase/hydrolase-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.0169) R2 : 0.434
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.818 (0.044) R2dC : 0.431 R2C : 0.424
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0862 (0.0355) R2dN8 : 0.00947 R2N8 : 0.00258
σ : 0.318
deviance : 46.14
__
_____
C
peak time of C : 6.68
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
37.71 0.289 11.3 -0.147 0.827 0.585 -0.131 0.446 -0.0115 6.57 19.9 5364 -- --
38.05 0.287 11.2 -0.0529 0.824 0.533 -0.0837 -- 0.00374 6.47 19.8 5341 -- --
37.75 0.286 11.3 -0.15 0.826 0.584 -- 0.448 -0.0117 6.56 19.9 5360 -- --
37.77 0.286 11.2 -0.122 0.836 0.513 -- -- -0.00194 6.54 19.9 3956 -- --
72.87 0.398 11.3 -0.11 -- 0.581 -- 0.453 0.0101 -- 19.9 6436 -- --
41.7 0.303 11.3 -0.407 0.824 -- -0.107 -- -0.132 6.65 -- -- -- --
41.73 0.303 11.3 -0.409 0.823 -- -- -- -0.132 6.65 -- -- -- --
73.08 0.398 11.3 -0.0645 -- 0.483 -- -- 0.0203 -- 19.9 6446 -- --
38 0.287 11.2 -- 0.82 0.552 -- -- 0.0152 6.55 19.9 3955 -- --
77.08 0.41 11.3 -0.39 -- -- -- -- -0.115 -- -- -- -- --
46.14 0.318 11.3 -- 0.818 -- -- -- -0.0862 6.68 -- -- -- --
73.06 0.398 11.3 -- -- 0.534 -- -- 0.0317 -- 19.9 3625 -- --
81.08 0.42 11.3 -- -- -- -- -- -0.072 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 32.89 temperature 10.0 270 > th dose dependent rect. 5 8
4 33.48 temperature 10.0 270 > th dose dependent rect. 6 18
16 34.16 wind 7.0 270 < th dose independent rect. 5 20
27 34.38 temperature 30.0 90 < th dose dependent rect. 3 16
29 34.39 temperature 15.0 10 > th dose dependent rect. 6 9
33 34.44 temperature 10.0 10 > th dose dependent rect. 6 21
54 34.67 wind 9.0 270 < th dose dependent rect. 5 20
89 34.96 wind 7.0 270 < th dose independent rect. 5 9
92 34.99 temperature 10.0 270 > th dose dependent rect. 19 16
104 35.09 temperature 10.0 10 > th dose dependent rect. 8 18
130 35.25 humidity 50.0 270 > th dose independent rect. 5 9
139 35.30 atmosphere 1010.0 270 < th dose independent rect. 5 8
145 35.31 temperature 25.0 270 > th dose independent rect. 5 7
166 35.38 wind 9.0 270 < th dose dependent rect. 5 8
204 35.49 temperature 20.0 270 > th dose dependent rect. 8 2
252 35.64 radiation 1.0 270 < th dose dependent rect. 1 10
289 35.73 temperature 30.0 90 < th dose independent rect. 3 15
296 35.74 radiation 1.0 270 < th dose dependent rect. 1 6
303 35.75 radiation 1.0 270 < th dose independent rect. 1 10
313 35.77 precipitation 0.1 270 < th dose independent rect. 1 4
315 35.77 precipitation 0.1 270 < th dose dependent rect. 1 4
317 35.78 temperature 25.0 270 < th dose independent rect. 24 18
320 35.79 radiation 1.0 270 < th dose independent rect. 1 6
325 35.80 precipitation 0.1 270 < th dose independent rect. 5 20
326 35.80 wind 1.0 14400 < th dose dependent rect. 1 1
329 35.80 precipitation 0.1 270 < th dose dependent rect. 5 20
339 35.84 wind 7.0 270 < th dose independent rect. 1 4
340 35.84 wind 7.0 270 < th dose independent rect. 17 8
347 35.85 temperature 10.0 270 > th dose independent rect. 1 4
349 35.85 temperature 30.0 270 < th dose independent rect. 1 4
350 35.85 humidity 50.0 270 > th dose independent rect. 1 4
353 35.85 atmosphere 995.0 270 > th dose independent rect. 1 4
354 35.85 atmosphere 1010.0 270 < th dose independent rect. 1 4
356 35.85 radiation 20.0 270 < th dose independent rect. 1 4
363 35.85 temperature 10.0 270 > th dose independent rect. 5 20
364 35.85 radiation 20.0 270 < th dose dependent rect. 1 4
371 35.86 temperature 30.0 10 < th dose independent rect. 3 16
379 35.87 temperature 15.0 270 > th dose independent rect. 5 8
381 35.87 temperature 25.0 90 > th dose dependent sin 7 NA
386 35.88 wind 1.0 270 > th dose independent rect. 1 4
393 35.88 temperature 20.0 10 > th dose dependent rect. 21 18
411 35.93 precipitation 0.1 270 < th dose independent rect. 5 8
415 35.93 precipitation 0.1 270 < th dose dependent rect. 5 8
422 35.94 humidity 50.0 270 > th dose independent rect. 14 15
427 35.95 atmosphere 995.0 270 > th dose independent rect. 5 8
430 35.95 temperature 10.0 270 > th dose independent rect. 13 16
480 36.01 temperature 25.0 270 > th dose dependent sin 9 NA
496 36.03 temperature 25.0 10 > th dose dependent sin 5 NA
510 36.06 temperature 25.0 270 > th dose independent rect. 18 19
511 36.06 radiation 1.0 270 > th dose independent rect. 17 21
551 36.10 radiation 1.0 270 < th dose dependent rect. 1 17
553 36.11 precipitation 0.1 270 < th dose independent rect. 17 8
554 36.11 radiation 1.0 270 < th dose independent rect. 1 17
558 36.11 precipitation 0.1 270 < th dose dependent rect. 17 8
583 36.14 humidity 50.0 270 > th dose dependent rect. 1 4
613 36.17 wind 1.0 14400 < th dose dependent rect. 24 4
627 36.19 radiation 1.0 270 > th dose independent rect. 18 19
644 36.21 precipitation 0.1 270 < th dose independent rect. 1 16
646 36.21 precipitation 0.1 270 < th dose dependent rect. 1 16
662 36.23 temperature 10.0 270 > th dose independent rect. 17 8
663 36.23 radiation 20.0 270 < th dose independent rect. 17 8
666 36.23 atmosphere 995.0 43200 > th dose independent rect. 20 13
667 36.23 temperature 10.0 270 > th dose independent rect. 1 16
669 36.23 atmosphere 1015.0 270 < th dose independent rect. 1 16
670 36.23 precipitation 0.1 270 < th dose independent rect. 13 16
676 36.23 precipitation 0.1 270 < th dose dependent rect. 13 16
680 36.24 atmosphere 995.0 43200 < th dose independent rect. 21 12
688 36.24 radiation 1.0 270 < th dose dependent sin 5 NA
689 36.24 wind 9.0 270 < th dose dependent rect. 1 4
699 36.25 temperature 25.0 270 < th dose independent rect. 24 13
701 36.25 radiation 40.0 270 < th dose independent rect. 13 16
712 36.26 wind 1.0 270 > th dose independent rect. 13 16
718 36.27 radiation 1.0 270 > th dose independent rect. 5 8
752 36.29 precipitation 0.1 270 < th dose independent rect. 24 6
755 36.29 precipitation 0.1 270 < th dose dependent rect. 24 6
756 36.29 wind 9.0 270 < th dose dependent rect. 17 8
780 36.31 radiation 1.0 270 > th dose independent sin 6 NA
781 36.31 atmosphere 995.0 43200 > th dose independent rect. 3 5
818 36.34 radiation 1.0 270 < th dose independent sin 6 NA
883 36.37 radiation 40.0 270 < th dose dependent rect. 17 8
923 36.39 humidity 50.0 10 > th dose independent rect. 6 9
947 36.41 atmosphere 995.0 43200 < th dose independent rect. 3 5
958 36.42 atmosphere 995.0 270 > th dose independent rect. 13 16
986 36.44 wind 9.0 270 < th dose independent rect. 13 16
989 36.44 atmosphere 995.0 43200 < th dose dependent rect. 2 6