Os02g0247200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to T-complex protein 1, gamma subunit (TCP-1-gamma) (CCT-gamma) (Matricin) (mTRiC-P5).
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Os02g0247200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to T-complex protein 1, gamma subunit (TCP-1-gamma) (CCT-gamma) (Matricin) (mTRiC-P5).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 121.2 | 0.517 | 8.95 | -0.973 | 1.32 | 1.75 | 0.773 | -2.6 | -0.16 | 21.7 | 25.3 | 1776 | -- | -- |
| 123.55 | 0.518 | 8.92 | -0.376 | 1.34 | 1.49 | 0.648 | -- | -0.148 | 21.8 | 23.63 | 1802 | -- | -- |
| 123.46 | 0.517 | 8.95 | -0.96 | 1.31 | 1.74 | -- | -2.42 | -0.151 | 21.7 | 25.3 | 1784 | -- | -- |
| 124.99 | 0.521 | 8.88 | -0.376 | 1.34 | 1.5 | -- | -- | -0.0172 | 21.7 | 25.17 | 1776 | -- | -- |
| 160.97 | 0.591 | 8.93 | -1.07 | -- | 2.62 | -- | -3.19 | -0.241 | -- | 24.5 | 815 | -- | -- |
| 193.96 | 0.653 | 8.85 | 0.111 | 1.48 | -- | 0.827 | -- | 0.145 | 21.5 | -- | -- | -- | -- |
| 196.46 | 0.656 | 8.85 | 0.0814 | 1.48 | -- | -- | -- | 0.144 | 21.4 | -- | -- | -- | -- |
| 163.86 | 0.596 | 8.86 | -0.476 | -- | 2.37 | -- | -- | -0.0952 | -- | 24.4 | 815 | -- | -- |
| 128.44 | 0.528 | 8.86 | -- | 1.34 | 1.39 | -- | -- | 0.0459 | 21.7 | 25.3 | 1777 | -- | -- |
| 324.13 | 0.841 | 8.81 | 0.0903 | -- | -- | -- | -- | 0.139 | -- | -- | -- | -- | -- |
| 196.63 | 0.656 | 8.85 | -- | 1.48 | -- | -- | -- | 0.135 | 21.4 | -- | -- | -- | -- |
| 169.39 | 0.606 | 8.85 | -- | -- | 2.28 | -- | -- | -0.0394 | -- | 24.4 | 799 | -- | -- |
| 324.35 | 0.841 | 8.81 | -- | -- | -- | -- | -- | 0.129 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 119.18 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 20 |
| 2 | 119.25 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 18 |
| 3 | 119.38 | temperature | 15 | 270 | > th | dose dependent | rect. | 8 | 21 |
| 7 | 119.67 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 21 |
| 14 | 120.57 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 3 |
| 24 | 121.00 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 33 | 121.32 | temperature | 15 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 74 | 122.53 | temperature | 25 | 1440 | > th | dose dependent | sin | 2 | NA |
| 80 | 122.63 | temperature | 30 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 94 | 122.86 | temperature | 25 | 1440 | > th | dose dependent | rect. | 8 | 11 |
| 348 | 124.74 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 361 | 124.82 | temperature | 20 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 370 | 124.92 | temperature | 20 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 392 | 125.13 | temperature | 20 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 421 | 125.54 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 18 |
| 431 | 125.64 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 15 |
| 480 | 125.93 | temperature | 15 | 270 | > th | dose dependent | rect. | 9 | 12 |
| 640 | 126.86 | temperature | 30 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 675 | 126.97 | temperature | 30 | 14400 | < th | dose dependent | rect. | 17 | 3 |
| 716 | 127.13 | temperature | 30 | 720 | < th | dose dependent | sin | 23 | NA |
| 761 | 127.33 | temperature | 25 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 839 | 127.60 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 849 | 127.63 | temperature | 10 | 1440 | > th | dose dependent | sin | 23 | NA |
| 850 | 127.63 | temperature | 30 | 270 | < th | dose dependent | sin | 21 | NA |
| 881 | 127.74 | temperature | 25 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 921 | 127.88 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 992 | 128.09 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 3 |