Os02g0246900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0246900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 475.57 | 1.02 | 6.35 | -4.45 | 2.45 | 5.4 | -2.71 | -3.46 | -0.674 | 11.5 | 8.821 | 380 | -- | -- |
| 483.54 | 1.02 | 6.28 | -3.91 | 2.53 | 5.24 | -2.71 | -- | -0.523 | 11.6 | 8.989 | 408 | -- | -- |
| 506.86 | 1.05 | 6.36 | -4.59 | 2.41 | 5.39 | -- | -3.74 | -0.687 | 11.5 | 6.816 | 364 | -- | -- |
| 515.1 | 1.06 | 6.29 | -4.01 | 2.65 | 5.22 | -- | -- | -0.526 | 11.6 | 4.562 | 437 | -- | -- |
| 624.94 | 1.16 | 6.47 | -5.15 | -- | 5.75 | -- | -6.35 | -0.926 | -- | 18.2 | 22 | -- | -- |
| 799.22 | 1.33 | 6.14 | -2.77 | 2.82 | -- | -2.39 | -- | 0.252 | 13.5 | -- | -- | -- | -- |
| 821.82 | 1.34 | 6.15 | -2.85 | 2.83 | -- | -- | -- | 0.24 | 13.6 | -- | -- | -- | -- |
| 661.04 | 1.2 | 6.38 | -4.16 | -- | 5.79 | -- | -- | -0.795 | -- | 17.59 | 12 | -- | -- |
| 884.35 | 1.39 | 6.15 | -- | 2.52 | 2.84 | -- | -- | 0.154 | 12.3 | 19.65 | 388 | -- | -- |
| 1310.55 | 1.69 | 6.18 | -2.96 | -- | -- | -- | -- | 0.178 | -- | -- | -- | -- | -- |
| 1035.32 | 1.51 | 6.08 | -- | 2.88 | -- | -- | -- | 0.557 | 13.6 | -- | -- | -- | -- |
| 1079.6 | 1.54 | 6.25 | -- | -- | 4.45 | -- | -- | -0.112 | -- | 19.3 | 23 | -- | -- |
| 1541.68 | 1.83 | 6.11 | -- | -- | -- | -- | -- | 0.507 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 469.63 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 22 |
| 3 | 470.63 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 12 | 472.94 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 19 | 476.28 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 36 | 480.36 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 64 | 483.78 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 76 | 486.04 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 79 | 486.54 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 111 | 490.43 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 126 | 491.61 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 23 |
| 162 | 494.01 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 172 | 494.80 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 21 |
| 173 | 494.87 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 20 |
| 199 | 496.52 | temperature | 15 | 1440 | > th | dose dependent | rect. | 17 | 11 |
| 204 | 496.66 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 14 |
| 235 | 497.41 | temperature | 15 | 1440 | > th | dose dependent | sin | 13 | NA |
| 257 | 497.82 | temperature | 30 | 1440 | < th | dose dependent | sin | 13 | NA |
| 362 | 499.46 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 23 |
| 494 | 501.44 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 6 |
| 659 | 503.39 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 703 | 503.92 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 2 |