Os02g0245900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0245900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 59.28 | 0.362 | 3.3 | 0.186 | 0.112 | 0.269 | 0.0774 | 1.25 | -0.0871 | 6.81 | 88.95 | 5884 | -- | -- |
| 61.38 | 0.365 | 3.29 | 0.128 | 0.137 | 0.293 | 0.0772 | -- | -0.113 | 7.19 | 88 | 8035 | -- | -- |
| 59.29 | 0.359 | 3.3 | 0.187 | 0.113 | 0.27 | -- | 1.25 | -0.0875 | 6.54 | 89 | 5896 | -- | -- |
| 61.39 | 0.365 | 3.29 | 0.132 | 0.136 | 0.293 | -- | -- | -0.115 | 6.95 | 88 | 8028 | -- | -- |
| 59.94 | 0.361 | 3.3 | 0.185 | -- | 0.266 | -- | 1.24 | -0.0824 | -- | 88 | 5832 | -- | -- |
| 62.78 | 0.371 | 3.28 | 0.0921 | 0.112 | -- | 0.0533 | -- | -0.0533 | 6.61 | -- | -- | -- | -- |
| 62.78 | 0.371 | 3.28 | 0.0927 | 0.113 | -- | -- | -- | -0.0535 | 6.42 | -- | -- | -- | -- |
| 62.18 | 0.367 | 3.29 | 0.139 | -- | 0.267 | -- | -- | -0.111 | -- | 88 | 8404 | -- | -- |
| 61.85 | 0.366 | 3.29 | -- | 0.124 | 0.269 | -- | -- | -0.117 | 6.88 | 87 | 8032 | -- | -- |
| 63.45 | 0.372 | 3.28 | 0.0956 | -- | -- | -- | -- | -0.0511 | -- | -- | -- | -- | -- |
| 63.01 | 0.371 | 3.28 | -- | 0.114 | -- | -- | -- | -0.0639 | 6.38 | -- | -- | -- | -- |
| 62.59 | 0.368 | 3.3 | -- | -- | 0.264 | -- | -- | -0.115 | -- | 91.66 | 5855 | -- | -- |
| 63.69 | 0.372 | 3.28 | -- | -- | -- | -- | -- | -0.0618 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.71 | temperature | 25.0 | 30 | > th | dose independent | rect. | 19 | 4 |
| 6 | 58.26 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 19 | 4 |
| 9 | 58.31 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 5 | 4 |
| 18 | 58.66 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 24 | 58.78 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 29 | 58.89 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 21 | 13 |
| 31 | 58.90 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 49 | 58.95 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 20 | 14 |
| 55 | 58.96 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 75 | 59.03 | temperature | 25.0 | 90 | > th | dose independent | rect. | 19 | 10 |
| 90 | 59.22 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 19 | 10 |
| 98 | 59.29 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 19 | 1 |
| 100 | 59.32 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 3 |
| 116 | 59.38 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 117 | 59.38 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 123 | 59.40 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 124 | 59.41 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 8 | 7 |
| 137 | 59.42 | humidity | 70.0 | 4320 | > th | dose independent | sin | 5 | NA |
| 138 | 59.42 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 141 | 59.43 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 8 | 5 |
| 143 | 59.43 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 21 | 23 |
| 147 | 59.45 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 8 | 7 |
| 190 | 59.47 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 3 | 10 |
| 209 | 59.48 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 11 | 2 |
| 210 | 59.48 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 213 | 59.48 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 3 | 12 |
| 214 | 59.48 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 23 | 16 |
| 217 | 59.49 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 11 | 2 |
| 224 | 59.50 | humidity | 70.0 | 4320 | < th | dose independent | sin | 4 | NA |
| 229 | 59.50 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 284 | 59.53 | temperature | 25.0 | 270 | > th | dose independent | rect. | 19 | 1 |
| 345 | 59.54 | humidity | 90.0 | 4320 | < th | dose dependent | sin | 4 | NA |
| 366 | 59.55 | wind | 1.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 368 | 59.55 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 387 | 59.55 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 5 | 6 |
| 400 | 59.55 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 23 | 16 |
| 408 | 59.56 | humidity | 50.0 | 4320 | > th | dose dependent | sin | 4 | NA |
| 427 | 59.57 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 568 | 59.61 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 8 |
| 580 | 59.61 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 8 |
| 688 | 59.65 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 3 | 23 |
| 780 | 59.68 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 14 | 22 |
| 841 | 59.70 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 23 | 16 |
| 888 | 59.71 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 8 | 21 |
| 897 | 59.71 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 14 | 1 |
| 921 | 59.72 | humidity | 70.0 | 4320 | > th | dose independent | no | NA | NA |
| 925 | 59.72 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 3 | 8 |
| 987 | 59.72 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 2 | 2 |