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Os02g0245200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.81 (0.0311) R2 : 0.632
β1 : -0.791 (0.114) R2dD : 0.0406 R2D : 0.0397
β2 : 2.04 (0.0755) R2dC : 0.592 R2C : 0.59
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0196 (0.0663) R2dN8 : 9.47e-05 R2N8 : -0.00258
σ : 0.584
deviance : 155.36
__
_____
C
peak time of C : 9.86
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
130.89 0.538 5.81 -0.826 1.96 -0.789 -0.76 2.26 0.000772 9.04 51 70 -- --
140.28 0.556 5.81 -0.741 1.91 -0.659 -1.37 -- 0.00596 9.19 51 70 -- --
132.53 0.536 5.81 -0.855 1.96 -0.79 -- 2.51 -0.000186 9.03 52 61 -- --
146.74 0.568 5.81 -0.791 1.91 -0.739 -- -- 0.0018 9.03 51 70 -- --
331.38 0.848 5.86 -0.838 -- -1.28 -- 2.77 0.000152 -- 50.73 2 -- --
147.72 0.57 5.81 -0.736 2.03 -- -1.41 -- 0.0229 9.9 -- -- -- --
155.36 0.584 5.81 -0.791 2.04 -- -- -- 0.0196 9.86 -- -- -- --
348.67 0.873 5.86 -0.795 -- -1.47 -- -- 0.00843 -- 39.24 4 -- --
163.23 0.598 5.79 -- 1.91 -0.739 -- -- 0.0899 9.06 51 70 -- --
403.56 0.939 5.86 -0.813 -- -- -- -- 0.0202 -- -- -- -- --
171.87 0.613 5.79 -- 2.04 -- -- -- 0.108 9.89 -- -- -- --
365.17 0.89 5.84 -- -- -1.22 -- -- 0.0954 -- 51 2 -- --
421 0.958 5.84 -- -- -- -- -- 0.11 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 123.83 humidity 50.0 90 > th dose dependent sin 6 NA
13 125.75 humidity 90.0 90 < th dose dependent sin 6 NA
21 126.44 humidity 90.0 10 < th dose dependent rect. 20 20
26 126.61 humidity 90.0 90 < th dose dependent rect. 20 19
34 126.83 humidity 90.0 10 < th dose dependent sin 4 NA
46 127.33 radiation 30.0 10 < th dose dependent sin 4 NA
50 127.43 radiation 1.0 10 > th dose dependent rect. 13 23
51 127.52 humidity 90.0 10 < th dose dependent rect. 20 16
63 127.80 humidity 90.0 10 < th dose dependent rect. 7 9
68 127.91 humidity 90.0 10 < th dose dependent rect. 7 7
79 128.15 humidity 90.0 10 < th dose dependent rect. 7 5
80 128.15 humidity 50.0 10 > th dose dependent rect. 21 23
87 128.29 radiation 1.0 10 > th dose dependent rect. 7 5
108 128.57 humidity 90.0 90 < th dose dependent rect. 2 12
114 128.65 humidity 90.0 10 < th dose dependent rect. 3 13
122 128.72 humidity 90.0 10 < th dose dependent rect. 24 16
130 128.81 radiation 1.0 10 > th dose dependent rect. 5 7
157 128.94 humidity 90.0 10 < th dose dependent rect. 24 14
171 129.08 humidity 60.0 90 > th dose dependent rect. 23 20
178 129.14 radiation 1.0 10 > th dose dependent rect. 15 21
213 129.42 humidity 90.0 10 < th dose dependent rect. 24 12
215 129.45 radiation 1.0 10 > th dose dependent sin 6 NA
230 129.45 radiation 30.0 10 < th dose dependent rect. 21 23
259 129.63 humidity 70.0 14400 < th dose dependent rect. 21 10
267 129.66 radiation 30.0 90 < th dose dependent sin 5 NA
268 129.66 humidity 50.0 90 > th dose dependent rect. 1 17
274 129.74 humidity 50.0 90 > th dose dependent rect. 3 15
281 129.80 humidity 70.0 14400 < th dose dependent rect. 6 1
299 129.89 radiation 10.0 10 > th dose dependent sin 8 NA
326 130.09 humidity 70.0 90 > th dose dependent rect. 23 15
328 130.10 radiation 20.0 10 > th dose independent rect. 16 20
331 130.10 humidity 60.0 90 > th dose dependent rect. 1 12
332 130.11 radiation 20.0 10 < th dose independent sin 6 NA
342 130.19 radiation 20.0 10 > th dose independent rect. 7 5
357 130.21 radiation 20.0 10 > th dose independent sin 6 NA
389 130.40 humidity 90.0 90 < th dose independent rect. 19 21
395 130.43 humidity 70.0 90 > th dose dependent rect. 23 12
429 130.57 humidity 50.0 10 > th dose dependent rect. 1 23
454 130.80 humidity 50.0 10 > th dose dependent rect. 3 23
477 130.91 temperature 20.0 720 < th dose independent rect. 5 1
478 130.91 radiation 1.0 90 > th dose dependent sin 6 NA
493 130.96 humidity 50.0 10 > th dose dependent rect. 16 23
500 131.03 temperature 25.0 270 < th dose independent rect. 22 8
502 131.03 radiation 30.0 10 < th dose dependent rect. 16 22
505 131.04 humidity 60.0 90 > th dose dependent rect. 3 10
555 131.20 humidity 60.0 30 > th dose dependent rect. 3 12
565 131.25 humidity 80.0 90 < th dose independent sin 5 NA
585 131.29 humidity 50.0 90 > th dose dependent rect. 11 23
643 131.56 humidity 50.0 10 > th dose dependent rect. 23 21
647 131.58 humidity 80.0 90 < th dose independent rect. 6 8
649 131.58 humidity 50.0 90 > th dose dependent no NA NA
652 131.59 humidity 70.0 10 > th dose independent rect. 1 18
655 131.61 humidity 70.0 10 > th dose independent rect. 3 16
675 131.69 humidity 90.0 10 < th dose independent rect. 7 9
694 131.73 humidity 90.0 10 < th dose dependent rect. 9 7
697 131.74 humidity 80.0 90 < th dose independent rect. 6 6
711 131.77 humidity 90.0 10 < th dose dependent rect. 9 3
723 131.78 radiation 30.0 10 < th dose dependent rect. 3 23
728 131.80 humidity 50.0 10 > th dose dependent no NA NA
749 131.86 humidity 90.0 10 < th dose dependent rect. 9 5
761 131.89 humidity 80.0 90 > th dose independent sin 5 NA
765 131.89 radiation 30.0 10 < th dose dependent rect. 1 23
766 131.90 humidity 80.0 90 < th dose independent rect. 2 12
781 131.94 humidity 50.0 10 > th dose dependent rect. 23 23
794 131.97 radiation 30.0 10 < th dose dependent rect. 13 23
798 131.98 radiation 30.0 10 < th dose dependent rect. 16 20
842 132.12 radiation 20.0 10 < th dose independent rect. 16 18
847 132.13 radiation 10.0 90 > th dose independent sin 4 NA
867 132.18 radiation 30.0 10 < th dose dependent no NA NA
898 132.23 radiation 20.0 10 > th dose independent rect. 13 23
899 132.23 radiation 1.0 10 > th dose dependent rect. 9 3
904 132.24 radiation 10.0 10 > th dose independent rect. 9 23
912 132.26 humidity 90.0 10 < th dose independent rect. 20 20
931 132.27 humidity 90.0 10 < th dose dependent rect. 7 18
938 132.30 radiation 20.0 10 < th dose independent rect. 21 23
946 132.32 radiation 10.0 90 < th dose dependent rect. 5 13
948 132.33 precipitation 0.1 270 > th dose independent rect. 2 2
964 132.37 radiation 20.0 90 < th dose independent sin 6 NA
970 132.39 precipitation 0.1 270 > th dose dependent rect. 2 2
973 132.39 radiation 30.0 10 < th dose dependent rect. 11 23
977 132.40 humidity 50.0 10 > th dose dependent rect. 11 23
986 132.42 radiation 1.0 10 > th dose dependent rect. 7 9