Os02g0244100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, RING-type domain containing protein.
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Os02g0244100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, RING-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 127.7 | 0.531 | 6.67 | -0.427 | 0.552 | -0.882 | -0.498 | -2.9 | -0.606 | 10.2 | 0.1501 | 6731 | -- | -- |
| 133.07 | 0.537 | 6.64 | -0.368 | 0.583 | -1.02 | -0.549 | -- | -0.609 | 10 | 0.997 | 7026 | -- | -- |
| 123.55 | 0.518 | 6.66 | -0.546 | 0.564 | -0.836 | -- | -2.81 | -0.663 | 10.1 | 0.0175 | 16312 | -- | -- |
| 127.12 | 0.525 | 6.65 | -0.32 | 0.533 | -1.25 | -- | -- | -0.62 | 10.2 | 0.9817 | 15998 | -- | -- |
| 141.69 | 0.554 | 6.66 | -0.519 | -- | -0.834 | -- | -2.89 | -0.63 | -- | 0.01198 | 16234 | -- | -- |
| 158.69 | 0.591 | 6.62 | -0.739 | 0.536 | -- | -0.533 | -- | -0.502 | 10.2 | -- | -- | -- | -- |
| 159.82 | 0.592 | 6.62 | -0.76 | 0.54 | -- | -- | -- | -0.504 | 10.1 | -- | -- | -- | -- |
| 144.24 | 0.559 | 6.66 | -0.325 | -- | -1.26 | -- | -- | -0.623 | -- | 0.9641 | 16095 | -- | -- |
| 126.56 | 0.524 | 6.65 | -- | 0.543 | -1.4 | -- | -- | -0.621 | 10 | 0.9998 | 19558 | -- | -- |
| 177.45 | 0.622 | 6.63 | -0.768 | -- | -- | -- | -- | -0.505 | -- | -- | -- | -- | -- |
| 175.06 | 0.619 | 6.6 | -- | 0.543 | -- | -- | -- | -0.419 | 10.2 | -- | -- | -- | -- |
| 144.37 | 0.56 | 6.66 | -- | -- | -1.41 | -- | -- | -0.623 | -- | 0.9161 | 19548 | -- | -- |
| 192.99 | 0.648 | 6.62 | -- | -- | -- | -- | -- | -0.42 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 115.36 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 13 |
| 2 | 115.48 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 3 | 115.48 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 13 |
| 4 | 115.49 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 6 | 115.85 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 10 | 115.98 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 11 | 115.98 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 10 |
| 12 | 115.98 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 10 |
| 16 | 116.11 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 18 | 116.11 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 24 | 116.44 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 26 | 116.50 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 29 | 116.59 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 30 | 116.59 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 6 |
| 31 | 116.63 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 32 | 116.63 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 38 | 116.78 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 45 | 117.05 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 1 | NA |
| 46 | 117.05 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 1 | NA |
| 47 | 117.05 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 1 | NA |
| 51 | 117.33 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 16 |
| 52 | 117.34 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 16 |
| 53 | 117.34 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 16 |
| 72 | 117.80 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 87 | 118.03 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 88 | 118.03 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 90 | 118.03 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 94 | 118.11 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 99 | 118.22 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 2 | NA |
| 115 | 118.72 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 120 | 118.76 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 121 | 118.76 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 11 |
| 129 | 118.90 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 9 |
| 132 | 118.95 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 9 |
| 134 | 118.95 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 9 |
| 138 | 118.97 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 205 | 120.05 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 10 |
| 221 | 120.29 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 17 |
| 222 | 120.37 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 223 | 120.37 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 250 | 120.68 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 5 |
| 257 | 120.79 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 258 | 120.79 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 267 | 120.89 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 18 | 2 |
| 277 | 121.04 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 2 |
| 295 | 121.21 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 339 | 121.61 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 7 |
| 340 | 121.61 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 7 |
| 360 | 121.72 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 5 |
| 388 | 121.90 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 389 | 121.91 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 403 | 122.01 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 422 | 122.08 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 11 |
| 423 | 122.08 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 11 |
| 439 | 122.13 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 11 |
| 499 | 122.55 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 529 | 122.74 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 11 |
| 585 | 123.03 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 616 | 123.24 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 657 | 123.54 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 661 | 123.56 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 676 | 123.67 | wind | 1.0 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 722 | 123.89 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 733 | 123.94 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 23 |
| 735 | 123.94 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 23 |
| 736 | 123.95 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 23 |
| 743 | 123.98 | precipitation | 0.1 | 14400 | > th | dose independent | no | NA | NA |
| 744 | 123.98 | precipitation | 0.1 | 14400 | < th | dose independent | no | NA | NA |
| 746 | 123.98 | precipitation | 0.1 | 14400 | < th | dose dependent | no | NA | NA |
| 753 | 124.00 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 760 | 124.02 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 23 |
| 761 | 124.02 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 23 |
| 762 | 124.02 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 23 |
| 765 | 124.05 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 23 |
| 772 | 124.08 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 23 |
| 776 | 124.08 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 23 |
| 780 | 124.11 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 23 |
| 782 | 124.11 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 23 |
| 784 | 124.12 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 851 | 124.35 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 23 |
| 866 | 124.41 | wind | 1.0 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 884 | 124.46 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 8 |
| 930 | 124.59 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 965 | 124.68 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 968 | 124.68 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 23 |