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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0242900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.38 (0.0432) R2 : 0.301
β1 : 1.3 (0.158) R2dD : 0.0871 R2D : 0.048
β2 : -- (--) R2dC : -- R2C : --
β3 : 2.24 (0.187) R2dE : 0.26 R2E : 0.216
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0579 (0.0971) R2dN8 : 0.00113 R2N8 : -0.0109
σ : 0.796
deviance : 292.12
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_____
C
peak time of C : --
E
wheather : radiation
threshold : 10.85
memory length : 1187
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 10.5
open length of G : 8.33

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
266.5 0.767 3.61 1.05 0.494 4.22 -0.821 8.89 -0.112 2.94 0.9982 4310 11.9 5
298.15 0.804 3.35 1.29 0.687 1.82 -0.375 -- 0.14 2.63 10.01 1397 10.3 8.26
268.3 0.763 3.61 1.07 0.495 4.24 -- 8.93 -0.11 2.6 0.9694 4292 11.9 5
296.35 0.802 3.36 1.08 0.639 1.82 -- -- 0.0885 2 10.17 1386 10.5 8.25
281.88 0.782 3.59 1.09 -- 4.38 -- 9.14 -0.0959 -- 0.9698 4088 11.9 4.98
369.23 0.901 3.43 0.797 0.52 -- -0.595 -- -0.33 2.72 -- -- -- --
370.37 0.901 3.43 0.811 0.516 -- -- -- -0.326 2.42 -- -- -- --
292.12 0.796 3.38 1.3 -- 2.24 -- -- 0.0579 -- 10.85 1187 10.5 8.33
317.01 0.829 3.4 -- 0.479 2.07 -- -- -0.131 2.39 7.705 1405 11.2 8.62
386.1 0.918 3.43 0.833 -- -- -- -- -0.313 -- -- -- -- --
387.72 0.921 3.45 -- 0.532 -- -- -- -0.416 2.44 -- -- -- --
314.73 0.826 3.38 -- -- 2.59 -- -- -0.133 -- 8.187 1188 11.1 7.47
404.41 0.939 3.45 -- -- -- -- -- -0.406 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 266.99 radiation 1 43200 < th dose dependent rect. 15 3
3 267.28 radiation 1 4320 < th dose independent rect. 12 5
4 267.67 atmosphere 1010 43200 < th dose independent rect. 5 3
5 267.68 radiation 1 43200 < th dose independent rect. 8 15
7 267.68 radiation 1 43200 < th dose independent rect. 8 19
9 267.69 radiation 1 43200 < th dose independent rect. 8 11
18 267.87 atmosphere 1010 43200 > th dose independent rect. 6 2
20 267.91 radiation 1 43200 > th dose independent rect. 8 10
26 268.14 radiation 1 4320 > th dose independent rect. 12 5
67 268.47 radiation 1 43200 < th dose dependent rect. 8 19
70 268.49 radiation 1 43200 < th dose dependent rect. 8 22
80 268.60 radiation 1 43200 < th dose dependent rect. 8 12
91 268.69 radiation 1 43200 < th dose dependent rect. 15 20
93 268.74 radiation 1 43200 < th dose independent sin 20 NA
96 268.74 radiation 1 43200 < th dose dependent rect. 22 20
109 268.79 radiation 1 43200 < th dose dependent rect. 4 14
157 268.92 radiation 1 43200 < th dose dependent sin 20 NA
160 268.92 radiation 1 43200 < th dose dependent rect. 4 23
161 268.92 radiation 1 43200 < th dose dependent rect. 22 23
162 268.93 radiation 1 43200 < th dose dependent no NA NA
181 268.94 radiation 1 43200 < th dose dependent rect. 1 23
259 269.12 radiation 1 43200 < th dose dependent rect. 14 13
327 269.29 radiation 1 43200 < th dose independent rect. 12 11
329 269.29 radiation 1 43200 < th dose independent rect. 12 15
333 269.30 radiation 1 43200 < th dose independent rect. 12 7
356 269.34 radiation 1 4320 < th dose independent rect. 9 8
407 269.46 radiation 1 43200 > th dose independent sin 20 NA
455 269.64 atmosphere 1010 43200 < th dose independent rect. 22 11
555 269.95 radiation 1 4320 > th dose independent rect. 9 8
557 269.96 atmosphere 1010 43200 < th dose independent rect. 22 1
566 270.01 atmosphere 1010 43200 < th dose independent sin 5 NA
573 270.04 radiation 40 43200 < th dose dependent rect. 18 9
574 270.04 radiation 1 43200 < th dose dependent rect. 22 13
589 270.08 radiation 1 43200 > th dose independent rect. 12 7
601 270.08 radiation 1 43200 < th dose dependent rect. 1 10
605 270.09 radiation 1 43200 > th dose independent rect. 13 5
615 270.11 radiation 1 43200 < th dose dependent rect. 4 7
655 270.24 atmosphere 1005 43200 > th dose dependent rect. 4 1
710 270.30 radiation 1 43200 < th dose independent rect. 12 23
717 270.33 atmosphere 1010 43200 > th dose independent rect. 4 12
766 270.41 radiation 1 43200 < th dose independent rect. 2 17
771 270.41 radiation 1 43200 < th dose independent rect. 2 21
779 270.42 radiation 1 43200 < th dose independent no NA NA
826 270.44 radiation 1 43200 < th dose independent rect. 15 23
840 270.47 atmosphere 1005 43200 > th dose dependent rect. 16 1
865 270.50 atmosphere 1005 43200 > th dose dependent rect. 4 3
907 270.58 atmosphere 1005 43200 > th dose dependent rect. 6 1
913 270.60 atmosphere 1010 43200 > th dose independent sin 4 NA
959 270.72 radiation 1 43200 < th dose independent rect. 10 23
961 270.72 radiation 1 43200 < th dose independent rect. 18 23