Os02g0242600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glutelin.
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Os02g0242600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glutelin.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 90.09 | 0.446 | 3.11 | 0.15 | 0.301 | -0.286 | 0.0373 | -0.277 | 0.0026 | 3.6 | 90.27 | 40 | -- | -- |
| 90.17 | 0.442 | 3.11 | 0.152 | 0.297 | -0.31 | -0.0825 | -- | 0.00224 | 3.63 | 91 | 28 | -- | -- |
| 90.09 | 0.442 | 3.11 | 0.148 | 0.3 | -0.287 | -- | -0.249 | 0.00238 | 3.6 | 90.37 | 38 | -- | -- |
| 90.2 | 0.442 | 3.11 | 0.141 | 0.294 | -0.308 | -- | -- | 0.00035 | 3.61 | 90.97 | 28 | -- | -- |
| 93.43 | 0.453 | 3.1 | 0.127 | -- | -0.0907 | -- | -0.196 | 0.0462 | -- | 92 | 28 | -- | -- |
| 92.19 | 0.45 | 3.1 | 0.101 | 0.159 | -- | -0.275 | -- | 0.0526 | 3.49 | -- | -- | -- | -- |
| 92.42 | 0.45 | 3.1 | 0.106 | 0.158 | -- | -- | -- | 0.0542 | 3.53 | -- | -- | -- | -- |
| 93.47 | 0.45 | 3.1 | 0.126 | -- | -0.108 | -- | -- | 0.0431 | -- | 92 | 32 | -- | -- |
| 90.72 | 0.444 | 3.11 | -- | 0.288 | -0.291 | -- | -- | -0.0119 | 3.58 | 90.95 | 32 | -- | -- |
| 93.82 | 0.453 | 3.1 | 0.113 | -- | -- | -- | -- | 0.0584 | -- | -- | -- | -- | -- |
| 92.72 | 0.45 | 3.1 | -- | 0.16 | -- | -- | -- | 0.0423 | 3.53 | -- | -- | -- | -- |
| 93.88 | 0.451 | 3.1 | -- | -- | -0.0955 | -- | -- | 0.031 | -- | 92 | 32 | -- | -- |
| 94.15 | 0.453 | 3.1 | -- | -- | -- | -- | -- | 0.0458 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.75 | temperature | 25.0 | 90 | > th | dose independent | rect. | 22 | 7 |
| 4 | 81.82 | temperature | 25.0 | 270 | > th | dose independent | rect. | 20 | 6 |
| 6 | 81.88 | temperature | 25.0 | 90 | > th | dose independent | rect. | 23 | 1 |
| 7 | 81.93 | temperature | 25.0 | 10 | > th | dose independent | rect. | 23 | 2 |
| 21 | 82.50 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 23 | 6 |
| 35 | 83.11 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 23 | 2 |
| 39 | 83.27 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 23 | 1 |
| 55 | 83.56 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 21 | 8 |
| 167 | 85.89 | temperature | 25.0 | 270 | < th | dose independent | rect. | 19 | 11 |
| 180 | 86.09 | temperature | 25.0 | 270 | > th | dose independent | sin | 11 | NA |
| 210 | 86.52 | temperature | 25.0 | 270 | < th | dose independent | sin | 11 | NA |
| 227 | 86.74 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 231 | 86.75 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 233 | 86.76 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 234 | 86.76 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 235 | 86.76 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 239 | 86.77 | wind | 9.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 240 | 86.77 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 243 | 86.77 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 246 | 86.77 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 247 | 86.77 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 249 | 86.77 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 254 | 86.77 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 255 | 86.77 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 256 | 86.77 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 258 | 86.77 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 259 | 86.77 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 264 | 86.77 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 277 | 86.81 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 278 | 86.81 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 285 | 86.86 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 297 | 86.94 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 301 | 86.96 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 304 | 86.96 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 308 | 86.96 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 318 | 86.96 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 319 | 86.96 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 340 | 86.96 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 343 | 86.96 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 349 | 86.97 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 412 | 87.24 | wind | 3.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 420 | 87.28 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 421 | 87.28 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 422 | 87.28 | wind | 5.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 443 | 87.34 | temperature | 10.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 444 | 87.34 | temperature | 30.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 445 | 87.34 | humidity | 50.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 448 | 87.34 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 450 | 87.34 | radiation | 1.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 455 | 87.34 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 24 | 1 |
| 457 | 87.34 | temperature | 10.0 | 30 | > th | dose independent | rect. | 1 | 23 |
| 459 | 87.34 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 464 | 87.34 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 465 | 87.35 | wind | 1.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 468 | 87.35 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 471 | 87.36 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 481 | 87.38 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 496 | 87.43 | humidity | 90.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 507 | 87.46 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 514 | 87.52 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 544 | 87.59 | humidity | 90.0 | 10 | < th | dose independent | rect. | 22 | 3 |
| 575 | 87.67 | wind | 9.0 | 30 | < th | dose independent | rect. | 1 | 23 |
| 581 | 87.69 | humidity | 90.0 | 270 | < th | dose independent | rect. | 21 | 4 |
| 591 | 87.72 | humidity | 90.0 | 270 | < th | dose independent | rect. | 20 | 7 |
| 599 | 87.74 | wind | 1.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 645 | 87.99 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 1 | 23 |
| 646 | 87.99 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 24 | 5 |
| 648 | 88.00 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 677 | 88.07 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 793 | 88.34 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 1 | 23 |
| 795 | 88.34 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 806 | 88.39 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 819 | 88.43 | humidity | 90.0 | 10 | < th | dose independent | rect. | 22 | 7 |
| 857 | 88.56 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 24 | 3 |
| 863 | 88.57 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 885 | 88.63 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 24 | 1 |
| 954 | 88.82 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 5 | 1 |