FiT-DB / Search/ Help/ Sample detail

Os02g0241700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.0254) R2 : 0.809
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.71 (0.066) R2dC : 0.286 R2C : 0.263
β3 : 2.58 (0.073) R2dE : 0.528 R2E : 0.472
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.467 (0.0535) R2dN8 : 0.0413 R2N8 : 0.0155
σ : 0.476
deviance : 104.46
__
_____
C
peak time of C : 17
E
wheather : temperature
threshold : 4.978
memory length : 348
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 13.2
open length of G : 15

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
104.23 0.48 10.9 -0.157 1.8 2.21 0.852 -1.03 -0.51 17.9 9.199 281 13.9 15.1
103.74 0.474 10.9 -0.0796 1.58 2.55 0.853 -- -0.431 17.1 6.72 335 13.3 14.8
105.52 0.478 10.9 -0.175 1.8 2.3 -- -0.886 -0.496 17.8 8.098 290 13.8 15.2
104.57 0.476 10.9 -0.042 1.71 2.55 -- -- -0.472 17.1 6.088 346 13.2 14.9
153.14 0.576 10.8 0.351 -- 2.67 -- 1.21 -0.398 -- 10.94 248 12.4 13.9
157.97 0.589 10.9 0.221 2.62 -- 0.578 -- -0.299 20.2 -- -- -- --
158.99 0.59 10.9 0.204 2.62 -- -- -- -0.298 20.2 -- -- -- --
126.98 0.525 10.8 0.0539 -- 3.08 -- -- -0.432 -- 6.393 391 11.2 13
104.46 0.476 10.9 -- 1.71 2.58 -- -- -0.467 17 4.978 348 13.2 15
536.98 1.08 10.8 0.183 -- -- -- -- -0.329 -- -- -- -- --
160.09 0.592 10.9 -- 2.62 -- -- -- -0.321 20.2 -- -- -- --
119.86 0.51 10.9 -- -- 3.2 -- -- -0.427 -- 9.742 415 11.3 12.1
537.87 1.08 10.8 -- -- -- -- -- -0.349 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 104.73 temperature 10.0 270 > th dose dependent rect. 14 15
4 106.14 temperature 10.0 270 > th dose dependent rect. 12 8
34 109.94 temperature 25.0 270 > th dose independent rect. 13 7
43 111.11 radiation 1.0 270 < th dose dependent rect. 16 9
44 111.15 radiation 1.0 270 < th dose independent rect. 16 9
57 111.75 temperature 15.0 10 > th dose dependent rect. 15 17
82 112.81 humidity 90.0 270 < th dose independent rect. 13 6
105 113.67 temperature 30.0 270 < th dose independent rect. 17 8
116 114.00 temperature 15.0 270 > th dose dependent rect. 15 2
117 114.08 temperature 20.0 90 > th dose dependent rect. 15 8
128 114.41 humidity 70.0 270 > th dose independent rect. 18 7
166 115.16 precipitation 0.1 270 < th dose independent rect. 14 15
167 115.16 precipitation 0.1 270 < th dose dependent rect. 14 15
170 115.20 temperature 10.0 270 > th dose dependent rect. 1 18
176 115.31 temperature 30.0 270 < th dose independent rect. 7 17
180 115.36 wind 9.0 270 < th dose independent rect. 14 15
186 115.44 humidity 90.0 270 < th dose independent rect. 15 2
204 115.81 temperature 25.0 270 > th dose independent rect. 15 2
206 115.88 humidity 50.0 270 > th dose independent rect. 7 17
208 115.88 temperature 30.0 270 < th dose dependent rect. 9 15
216 115.98 radiation 1.0 270 < th dose dependent sin 16 NA
220 116.10 radiation 1.0 270 > th dose independent sin 16 NA
223 116.12 wind 9.0 270 < th dose independent rect. 1 17
224 116.13 radiation 1.0 270 < th dose independent sin 16 NA
236 116.27 radiation 1.0 270 < th dose dependent rect. 6 19
249 116.47 wind 1.0 270 > th dose independent rect. 12 7
252 116.51 precipitation 0.1 10 < th dose independent rect. 2 18
253 116.51 precipitation 0.1 10 < th dose dependent rect. 2 18
256 116.57 temperature 15.0 10 > th dose dependent rect. 15 8
268 116.83 precipitation 0.1 270 < th dose independent rect. 5 9
269 116.83 precipitation 0.1 270 < th dose dependent rect. 5 9
279 116.95 temperature 10.0 270 > th dose independent rect. 5 9
280 116.95 atmosphere 995.0 270 > th dose independent rect. 5 9
281 116.95 atmosphere 1015.0 270 < th dose independent rect. 5 9
282 116.95 temperature 10.0 270 > th dose independent rect. 14 15
295 117.12 wind 9.0 10 < th dose independent rect. 2 18
302 117.18 temperature 30.0 270 < th dose dependent rect. 17 8
307 117.20 wind 9.0 270 < th dose independent rect. 13 6
310 117.21 temperature 30.0 90 < th dose dependent rect. 19 6
342 117.59 temperature 10.0 270 > th dose independent rect. 18 7
344 117.59 radiation 20.0 270 < th dose independent rect. 18 7
347 117.59 temperature 10.0 270 > th dose independent rect. 1 17
348 117.59 atmosphere 1015.0 270 < th dose independent rect. 1 17
350 117.61 atmosphere 995.0 270 > th dose independent rect. 18 7
370 117.79 radiation 10.0 10 < th dose independent rect. 2 18
372 117.80 wind 9.0 270 < th dose independent rect. 18 7
398 117.92 wind 9.0 270 < th dose independent rect. 5 9
399 117.92 precipitation 0.1 270 < th dose independent rect. 1 18
400 117.92 precipitation 0.1 270 < th dose dependent rect. 1 18
422 118.04 humidity 50.0 270 > th dose dependent rect. 17 8
429 118.14 temperature 10.0 10 > th dose independent rect. 20 6
430 118.14 temperature 30.0 10 < th dose independent rect. 20 6
431 118.14 humidity 50.0 10 > th dose independent rect. 20 6
434 118.14 atmosphere 995.0 10 > th dose independent rect. 20 6
435 118.14 radiation 1.0 10 < th dose independent rect. 20 6
440 118.14 temperature 10.0 10 > th dose independent rect. 2 18
442 118.14 atmosphere 1015.0 10 < th dose independent rect. 2 18
444 118.14 radiation 1.0 10 < th dose dependent rect. 20 6
460 118.23 wind 9.0 10 < th dose independent rect. 20 6
461 118.24 wind 7.0 270 < th dose independent rect. 24 7
462 118.24 precipitation 0.1 270 < th dose independent rect. 24 7
463 118.24 precipitation 0.1 270 < th dose dependent rect. 24 7
468 118.30 wind 7.0 30 < th dose independent rect. 15 5
469 118.30 atmosphere 1010.0 270 < th dose independent rect. 24 7
470 118.31 radiation 1.0 270 > th dose independent rect. 14 15
472 118.35 radiation 1.0 270 > th dose independent rect. 15 2
473 118.35 radiation 1.0 270 > th dose independent rect. 14 5
474 118.35 temperature 10.0 270 > th dose independent rect. 13 6
476 118.35 atmosphere 1010.0 270 < th dose independent rect. 13 6
487 118.35 temperature 10.0 270 > th dose independent rect. 19 18
488 118.35 atmosphere 995.0 270 > th dose independent rect. 19 18
500 118.42 temperature 10.0 270 > th dose independent rect. 24 7
501 118.42 temperature 30.0 270 < th dose independent rect. 24 7
502 118.42 humidity 50.0 270 > th dose independent rect. 24 7
504 118.42 atmosphere 995.0 270 > th dose independent rect. 24 7
505 118.42 radiation 40.0 270 < th dose independent rect. 24 7
506 118.42 temperature 10.0 270 > th dose independent rect. 7 17
518 118.55 temperature 10.0 270 > th dose dependent sin 18 NA
531 118.65 radiation 20.0 10 < th dose dependent rect. 2 18
533 118.67 precipitation 0.1 270 < th dose independent rect. 13 6
535 118.67 precipitation 0.1 270 < th dose dependent rect. 13 6
570 118.87 wind 9.0 270 < th dose independent rect. 19 18
576 118.94 temperature 30.0 10 < th dose dependent rect. 20 6
581 118.96 radiation 40.0 270 < th dose dependent rect. 24 8
630 119.15 wind 1.0 270 > th dose independent rect. 19 6
673 119.29 radiation 40.0 270 < th dose independent rect. 14 15
678 119.30 radiation 40.0 14400 < th dose dependent rect. 21 6
697 119.33 precipitation 0.1 10 < th dose independent rect. 15 5
699 119.33 precipitation 0.1 10 < th dose dependent rect. 15 5
747 119.44 atmosphere 995.0 10 > th dose independent rect. 2 18
764 119.52 atmosphere 995.0 270 > th dose independent rect. 1 17
875 119.86 atmosphere 1015.0 270 < th dose independent rect. 14 15
878 119.87 radiation 1.0 270 > th dose independent rect. 6 8
880 119.88 humidity 50.0 10 > th dose dependent rect. 20 6
890 119.94 wind 9.0 270 < th dose independent rect. 15 2
901 120.03 precipitation 0.1 10 < th dose independent rect. 20 6
902 120.03 precipitation 0.1 10 < th dose dependent rect. 20 6
906 120.06 temperature 10.0 1440 > th dose independent rect. 21 6
909 120.06 temperature 30.0 1440 < th dose independent rect. 21 6
913 120.06 humidity 50.0 1440 > th dose independent rect. 21 6
919 120.06 atmosphere 995.0 1440 > th dose independent rect. 21 6
920 120.06 radiation 1.0 1440 < th dose independent rect. 21 6
950 120.06 temperature 10.0 1440 > th dose independent rect. 3 18
964 120.10 radiation 40.0 1440 < th dose dependent rect. 21 6