Os02g0236500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, TTF-type domain containing protein.
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Os02g0236500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, TTF-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 252.8 | 0.747 | 13.9 | 2.35 | 0.0864 | 5.16 | -0.909 | -26.5 | -0.651 | 20 | 1000 | 283 | -- | -- |
| 261.44 | 0.759 | 14.2 | 0.685 | 0.0706 | 0.502 | -0.887 | -- | -0.65 | 20 | 1000 | 283 | -- | -- |
| 254.7 | 0.749 | 13.9 | 2.42 | 0.0951 | 4.86 | -- | -24.8 | -0.652 | 20 | 1000 | 281 | -- | -- |
| 263.75 | 0.761 | 14.2 | 0.711 | 0.077 | 0.505 | -- | -- | -0.65 | 18.8 | 1000 | 283 | -- | -- |
| 255.2 | 0.748 | 13.9 | 2.39 | -- | 4.8 | -- | -24.4 | -0.653 | -- | 1000 | 281 | -- | -- |
| 268.55 | 0.768 | 14.2 | 0.593 | 0.0672 | -- | -0.9 | -- | -0.615 | 19.9 | -- | -- | -- | -- |
| 270.93 | 0.771 | 14.2 | 0.618 | 0.069 | -- | -- | -- | -0.616 | 19.5 | -- | -- | -- | -- |
| 264.06 | 0.76 | 14.2 | 0.709 | -- | 0.502 | -- | -- | -0.652 | -- | 1000 | 283 | -- | -- |
| 276.66 | 0.779 | 14.2 | -- | 0.0682 | 0.386 | -- | -- | -0.719 | 19.6 | 1000 | 283 | -- | -- |
| 271.19 | 0.769 | 14.2 | 0.617 | -- | -- | -- | -- | -0.617 | -- | -- | -- | -- | -- |
| 281 | 0.784 | 14.2 | -- | 0.0643 | -- | -- | -- | -0.685 | 20.1 | -- | -- | -- | -- |
| 276.91 | 0.778 | 14.2 | -- | -- | 0.385 | -- | -- | -0.72 | -- | 1000 | 283 | -- | -- |
| 281.22 | 0.783 | 14.2 | -- | -- | -- | -- | -- | -0.685 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 240.35 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 2 | 241.54 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 4 | 242.43 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 8 | 243.96 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 12 | 244.66 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 13 | 244.75 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 15 | 244.93 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 19 | 245.17 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 26 | 245.67 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 6 | 2 |
| 27 | 245.68 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 37 | 246.21 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 44 | 246.52 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 58 | 246.89 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 62 | 247.02 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 22 | 6 |
| 65 | 247.05 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 68 | 247.12 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 13 |
| 69 | 247.14 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 22 | 4 |
| 73 | 247.20 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 78 | 247.24 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 88 | 247.37 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 15 |
| 89 | 247.39 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 95 | 247.49 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 98 | 247.51 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 13 |
| 123 | 247.75 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 6 | 6 |
| 133 | 247.87 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 15 |
| 145 | 248.02 | wind | 3.0 | 14400 | < th | dose independent | sin | 6 | NA |
| 151 | 248.08 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 172 | 248.25 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 173 | 248.25 | atmosphere | 1000.0 | 30 | < th | dose independent | rect. | 11 | 19 |
| 179 | 248.27 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 190 | 248.33 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 191 | 248.35 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 193 | 248.36 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 10 | 17 |
| 208 | 248.51 | wind | 3.0 | 14400 | > th | dose independent | sin | 6 | NA |
| 231 | 248.65 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 2 | 4 |
| 277 | 248.90 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 285 | 248.96 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 291 | 248.99 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 305 | 249.10 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 309 | 249.12 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 312 | 249.15 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 315 | 249.16 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 323 | 249.17 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 13 |
| 340 | 249.31 | atmosphere | 1000.0 | 270 | > th | dose independent | sin | 18 | NA |
| 356 | 249.43 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 382 | 249.55 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 12 | 3 |
| 400 | 249.60 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 413 | 249.65 | atmosphere | 1000.0 | 270 | < th | dose independent | sin | 18 | NA |
| 456 | 249.81 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 12 |
| 471 | 249.89 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 484 | 249.94 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 16 |
| 498 | 250.00 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 505 | 250.01 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 9 | 3 |
| 532 | 250.08 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 543 | 250.10 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 563 | 250.17 | wind | 1.0 | 14400 | > th | dose independent | rect. | 9 | 3 |
| 593 | 250.28 | temperature | 25.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 607 | 250.32 | wind | 3.0 | 14400 | < th | dose dependent | sin | 5 | NA |
| 628 | 250.39 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 629 | 250.41 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 632 | 250.42 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 6 |
| 634 | 250.43 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 635 | 250.43 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 678 | 250.55 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 691 | 250.60 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 21 | 4 |
| 699 | 250.62 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 702 | 250.62 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 712 | 250.66 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 12 | 1 |
| 730 | 250.72 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 731 | 250.72 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 732 | 250.72 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 738 | 250.75 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 756 | 250.81 | wind | 1.0 | 14400 | < th | dose independent | rect. | 9 | 4 |
| 769 | 250.84 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 780 | 250.88 | wind | 5.0 | 1440 | < th | dose independent | rect. | 20 | 14 |
| 795 | 250.91 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 803 | 250.93 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 8 | 3 |
| 813 | 250.95 | wind | 5.0 | 1440 | > th | dose independent | rect. | 20 | 14 |
| 898 | 251.20 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 8 | 4 |
| 907 | 251.20 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 8 |
| 908 | 251.20 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 23 | 8 |
| 918 | 251.24 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 2 | 10 |
| 951 | 251.34 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 954 | 251.34 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 980 | 251.40 | atmosphere | 1000.0 | 10 | > th | dose independent | sin | 16 | NA |
| 981 | 251.40 | atmosphere | 1000.0 | 10 | < th | dose independent | sin | 16 | NA |