Os02g0236200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Shaggy-related protein kinase eta (EC 2.7.1.-) (ASK-eta) (BRASSINOSTEROID-INSENSITIVE 2) (ULTRACURVATA1).
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Os02g0236200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Shaggy-related protein kinase eta (EC 2.7.1.-) (ASK-eta) (BRASSINOSTEROID-INSENSITIVE 2) (ULTRACURVATA1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.66 | 0.317 | 9.64 | 0.0548 | 0.753 | 1.96 | -0.169 | 0.0546 | 0.0654 | 10.7 | 27.86 | 70 | -- | -- |
| 45.54 | 0.314 | 9.63 | 0.0716 | 0.721 | 1.96 | -0.19 | -- | 0.0767 | 10.6 | 27.68 | 85 | -- | -- |
| 45.58 | 0.314 | 9.64 | 0.0225 | 0.728 | 1.97 | -- | 0.236 | 0.0588 | 10.7 | 27.63 | 90 | -- | -- |
| 45.64 | 0.315 | 9.64 | 0.0707 | 0.725 | 1.97 | -- | -- | 0.0713 | 10.7 | 27.71 | 90 | -- | -- |
| 60 | 0.361 | 9.67 | -0.0585 | -- | 1.91 | -- | 0.415 | 0.0265 | -- | 27.04 | 383 | -- | -- |
| 98.72 | 0.466 | 9.73 | -0.421 | 0.674 | -- | -0.391 | -- | -0.356 | 7.49 | -- | -- | -- | -- |
| 99.14 | 0.466 | 9.73 | -0.43 | 0.673 | -- | -- | -- | -0.355 | 7.49 | -- | -- | -- | -- |
| 59.74 | 0.36 | 9.65 | 0.0711 | -- | 1.94 | -- | -- | 0.0766 | -- | 27.17 | 388 | -- | -- |
| 45.75 | 0.315 | 9.64 | -- | 0.717 | 1.94 | -- | -- | 0.0606 | 10.6 | 27.65 | 92 | -- | -- |
| 123.37 | 0.519 | 9.75 | -0.42 | -- | -- | -- | -- | -0.344 | -- | -- | -- | -- | -- |
| 104.03 | 0.477 | 9.72 | -- | 0.669 | -- | -- | -- | -0.307 | 7.53 | -- | -- | -- | -- |
| 59.86 | 0.36 | 9.65 | -- | -- | 1.92 | -- | -- | 0.0629 | -- | 27.18 | 387 | -- | -- |
| 128.03 | 0.528 | 9.74 | -- | -- | -- | -- | -- | -0.298 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.70 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 3 | 44.31 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 4 | 46.32 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 13 | 47.13 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 16 | 47.24 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 19 | 47.34 | temperature | 30 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 20 | 47.39 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 23 | 47.66 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 24 | 47.68 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 50 | 48.72 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 59 | 48.91 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 64 | 49.12 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 74 | 49.29 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 81 | 49.48 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 117 | 50.22 | temperature | 15 | 30 | > th | dose dependent | no | NA | NA |
| 218 | 52.02 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 234 | 52.23 | temperature | 20 | 270 | > th | dose dependent | sin | 10 | NA |
| 287 | 52.89 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 289 | 52.91 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 23 |
| 344 | 53.81 | temperature | 30 | 270 | < th | dose dependent | sin | 10 | NA |
| 387 | 54.43 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 405 | 54.68 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 467 | 55.51 | temperature | 25 | 1440 | < th | dose independent | rect. | 9 | 18 |
| 496 | 55.69 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 18 |
| 544 | 56.05 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 551 | 56.08 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 560 | 56.13 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 17 |
| 641 | 56.64 | temperature | 25 | 1440 | < th | dose independent | rect. | 13 | 14 |
| 657 | 56.72 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 19 |
| 714 | 57.00 | temperature | 25 | 1440 | < th | dose independent | sin | 16 | NA |
| 729 | 57.06 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 734 | 57.07 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 756 | 57.17 | temperature | 25 | 1440 | < th | dose independent | rect. | 23 | 22 |
| 778 | 57.25 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 801 | 57.35 | temperature | 25 | 1440 | < th | dose independent | no | NA | NA |
| 806 | 57.35 | temperature | 25 | 1440 | < th | dose independent | rect. | 20 | 23 |
| 862 | 57.57 | temperature | 25 | 1440 | > th | dose independent | sin | 16 | NA |
| 910 | 57.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 948 | 57.84 | temperature | 25 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 959 | 57.87 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 968 | 57.90 | temperature | 25 | 1440 | > th | dose independent | rect. | 20 | 23 |
| 978 | 57.92 | temperature | 25 | 720 | > th | dose independent | rect. | 13 | 22 |
| 992 | 57.96 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 23 |