Os02g0236100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to SERK1 (Fragment).
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Os02g0236100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to SERK1 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.67 | 0.292 | 10.3 | -0.00582 | 0.315 | -1.16 | -0.925 | 0.653 | 0.0516 | 13.6 | 10.05 | 12 | -- | -- |
| 38.83 | 0.292 | 10.3 | -0.102 | 0.324 | -1.16 | -0.764 | -- | 0.026 | 13.6 | 10.05 | 12 | -- | -- |
| 40.81 | 0.3 | 10.3 | -0.185 | 0.347 | -1.2 | -- | -0.5 | 0.011 | 14.2 | 10.05 | 12 | -- | -- |
| 40.94 | 0.298 | 10.3 | -0.109 | 0.345 | -1.23 | -- | -- | 0.0329 | 14.3 | 14.4 | 20 | -- | -- |
| 45.52 | 0.314 | 10.3 | -0.253 | -- | -0.812 | -- | -0.388 | -0.0451 | -- | 8.356 | 21 | -- | -- |
| 51.69 | 0.337 | 10.3 | -0.316 | 0.00155 | -- | -0.899 | -- | -0.136 | 12.4 | -- | -- | -- | -- |
| 55.16 | 0.348 | 10.3 | -0.351 | 0.0121 | -- | -- | -- | -0.141 | 7.71 | -- | -- | -- | -- |
| 45.65 | 0.315 | 10.3 | -0.199 | -- | -0.821 | -- | -- | -0.0313 | -- | 11.71 | 29 | -- | -- |
| 41.22 | 0.299 | 10.3 | -- | 0.362 | -1.28 | -- | -- | 0.0511 | 14.3 | 13.59 | 21 | -- | -- |
| 55.17 | 0.347 | 10.3 | -0.351 | -- | -- | -- | -- | -0.14 | -- | -- | -- | -- | -- |
| 58.4 | 0.357 | 10.3 | -- | 0.0113 | -- | -- | -- | -0.102 | 9.99 | -- | -- | -- | -- |
| 43.63 | 0.308 | 10.3 | -- | -- | -0.878 | -- | -- | 0.0231 | -- | 8.887 | 1340 | -- | -- |
| 58.41 | 0.357 | 10.3 | -- | -- | -- | -- | -- | -0.102 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.60 | temperature | 20 | 30 | > th | dose dependent | rect. | 3 | 19 |
| 3 | 37.85 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 21 |
| 5 | 37.90 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 21 |
| 9 | 38.07 | temperature | 20 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 21 | 38.28 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 24 | 38.29 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 34 | 38.49 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 21 |
| 37 | 38.52 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 42 | 38.54 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 46 | 38.55 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 51 | 38.59 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 21 |
| 53 | 38.60 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 21 |
| 64 | 38.67 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 67 | 38.70 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 69 | 38.70 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 72 | 38.73 | temperature | 15 | 270 | > th | dose dependent | rect. | 24 | 22 |
| 93 | 38.82 | temperature | 20 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 94 | 38.82 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 111 | 38.88 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 141 | 38.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 144 | 38.95 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 145 | 38.97 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 160 | 38.99 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 166 | 39.00 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 167 | 39.01 | temperature | 15 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 194 | 39.09 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 246 | 39.20 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 14 |
| 300 | 39.25 | temperature | 30 | 10 | < th | dose dependent | rect. | 20 | 23 |
| 324 | 39.28 | temperature | 30 | 90 | < th | dose dependent | rect. | 20 | 23 |
| 325 | 39.29 | temperature | 25 | 30 | > th | dose independent | rect. | 19 | 1 |
| 371 | 39.32 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 18 |
| 393 | 39.34 | temperature | 10 | 1440 | > th | dose dependent | sin | 23 | NA |
| 395 | 39.34 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 451 | 39.37 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 549 | 39.41 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 633 | 39.45 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 13 |
| 659 | 39.46 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 10 |
| 747 | 39.48 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 817 | 39.51 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 15 |
| 972 | 39.56 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 21 |
| 999 | 39.58 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |