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Os02g0235000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : ARP2/3 complex, 21 kDa p21-Arc subunit family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0209) R2 : 0.161
β1 : -0.708 (0.0765) R2dD : 0.164 R2D : 0.161
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0195 (0.0446) R2dN8 : 0.000473 R2N8 : -0.00258
σ : 0.392
deviance : 70.31
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
53.37 0.343 11.9 -1.43 0.351 0.687 -0.287 -1.76 -0.302 6.79 20.66 1783 -- --
55.71 0.348 11.9 -0.959 0.362 0.648 -0.0991 -- -0.178 6.63 19.03 1987 -- --
53.53 0.341 11.9 -1.42 0.346 0.681 -- -1.71 -0.296 6.47 20.53 1771 -- --
55.65 0.347 11.9 -0.977 0.358 0.681 -- -- -0.168 6.9 17.01 2039 -- --
58.08 0.355 11.9 -1.33 -- 0.666 -- -1.39 -0.27 -- 19.1 1385 -- --
65.63 0.38 11.9 -0.713 0.298 -- -0.172 -- -0.0261 6.56 -- -- -- --
65.67 0.38 11.9 -0.716 0.299 -- -- -- -0.026 6.3 -- -- -- --
59.95 0.361 11.9 -0.999 -- 0.708 -- -- -0.167 -- 14.2 2806 -- --
73.42 0.399 11.9 -- 0.468 0.476 -- -- 0.0663 6.55 27.6 455 -- --
70.31 0.392 11.9 -0.708 -- -- -- -- -0.0195 -- -- -- -- --
79.18 0.416 11.8 -- 0.289 -- -- -- 0.0537 6.43 -- -- -- --
78.78 0.413 11.8 -- -- 0.314 -- -- 0.101 -- 28.7 1171 -- --
83.52 0.427 11.8 -- -- -- -- -- 0.059 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 49.96 wind 9 43200 > th dose dependent rect. 18 13
2 50.04 wind 9 43200 > th dose dependent rect. 18 11
4 50.11 wind 9 43200 > th dose dependent rect. 18 6
9 50.51 wind 9 43200 > th dose dependent rect. 18 3
10 50.54 atmosphere 995 43200 < th dose dependent rect. 15 1
11 50.64 atmosphere 995 43200 < th dose independent rect. 14 1
14 50.69 wind 9 43200 > th dose independent rect. 18 3
15 50.70 wind 9 43200 < th dose independent rect. 18 3
21 50.83 atmosphere 995 43200 < th dose independent rect. 7 9
33 50.93 atmosphere 995 43200 > th dose independent rect. 8 7
35 50.96 atmosphere 995 43200 > th dose independent rect. 11 4
38 50.97 atmosphere 995 43200 > th dose independent rect. 12 1
58 51.20 wind 9 43200 > th dose independent rect. 18 6
68 51.26 wind 9 43200 > th dose independent rect. 18 9
94 51.44 wind 9 43200 > th dose independent rect. 18 13
95 51.44 radiation 1 43200 < th dose dependent rect. 21 6
110 51.53 radiation 1 43200 < th dose dependent rect. 24 3
119 51.54 radiation 1 43200 < th dose dependent rect. 22 3
139 51.59 radiation 1 43200 < th dose dependent rect. 24 1
186 51.75 wind 7 43200 > th dose independent rect. 6 1
223 52.03 atmosphere 995 43200 < th dose independent sin 23 NA
230 52.05 wind 9 43200 < th dose independent rect. 18 7
231 52.05 wind 9 43200 < th dose independent rect. 18 9
232 52.06 atmosphere 995 43200 > th dose independent sin 23 NA
246 52.13 wind 9 43200 < th dose independent rect. 18 14
262 52.30 radiation 1 14400 > th dose independent rect. 18 11
277 52.50 wind 1 43200 > th dose dependent rect. 20 1
284 52.56 wind 7 43200 < th dose independent rect. 6 1
285 52.56 temperature 20 270 > th dose dependent rect. 23 21
287 52.58 radiation 1 14400 > th dose independent rect. 18 1
301 52.60 wind 9 43200 < th dose dependent rect. 20 1
319 52.76 temperature 20 270 > th dose dependent rect. 12 22
323 52.79 wind 9 43200 > th dose dependent sin 13 NA
331 52.82 temperature 20 1440 > th dose dependent rect. 17 4
340 52.86 temperature 20 1440 > th dose dependent rect. 20 1
354 52.94 temperature 20 1440 > th dose dependent rect. 18 1
359 52.96 wind 5 43200 < th dose independent rect. 6 14
361 52.98 wind 3 43200 > th dose independent rect. 20 2
370 53.01 wind 3 43200 < th dose independent rect. 20 2
392 53.08 wind 5 43200 > th dose independent rect. 6 14
411 53.13 wind 3 43200 > th dose dependent rect. 6 15
415 53.15 wind 5 43200 < th dose independent sin 22 NA
429 53.18 temperature 20 1440 > th dose dependent rect. 14 17
457 53.23 wind 5 43200 > th dose independent sin 21 NA
461 53.23 temperature 20 1440 > th dose dependent sin 14 NA
485 53.26 wind 5 43200 > th dose independent rect. 9 12
506 53.31 wind 5 43200 < th dose independent rect. 13 19
524 53.33 wind 3 43200 > th dose dependent rect. 8 17
528 53.34 wind 5 43200 < th dose independent rect. 9 8
542 53.36 wind 5 43200 < th dose independent rect. 11 16
543 53.36 wind 5 43200 > th dose independent rect. 13 18
552 53.37 wind 5 43200 > th dose independent rect. 15 1
554 53.37 wind 5 43200 < th dose independent rect. 11 14
556 53.37 wind 3 43200 > th dose dependent sin 22 NA
565 53.38 wind 5 43200 > th dose independent rect. 11 14
568 53.38 wind 5 43200 < th dose independent rect. 9 16
603 53.42 wind 5 43200 > th dose independent rect. 13 14
610 53.43 radiation 1 14400 < th dose independent rect. 18 11
622 53.44 wind 5 43200 > th dose independent rect. 9 9
648 53.46 temperature 20 720 > th dose dependent rect. 19 16
665 53.48 humidity 90 4320 > th dose independent rect. 18 1
677 53.49 humidity 90 4320 < th dose independent rect. 18 1
697 53.50 wind 3 43200 > th dose dependent rect. 8 9
704 53.51 temperature 30 4320 < th dose independent rect. 14 2
719 53.52 temperature 10 1440 > th dose dependent rect. 17 2
777 53.57 wind 5 43200 < th dose independent rect. 15 1
778 53.57 temperature 25 1440 > th dose independent rect. 19 2
828 53.60 wind 7 43200 > th dose dependent rect. 13 22
842 53.62 temperature 20 720 > th dose dependent sin 7 NA
850 53.63 temperature 30 1440 < th dose dependent rect. 18 1
881 53.65 wind 5 43200 > th dose independent rect. 11 5
926 53.68 wind 3 43200 > th dose dependent rect. 13 19
930 53.68 wind 3 43200 > th dose dependent rect. 13 21
948 53.70 temperature 30 4320 > th dose independent rect. 14 2
949 53.70 wind 5 43200 < th dose independent rect. 11 5
962 53.71 wind 5 43200 > th dose dependent rect. 15 1
972 53.71 wind 3 43200 > th dose dependent rect. 11 20
981 53.72 temperature 20 1440 > th dose dependent rect. 6 1