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Os02g0234400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.2 (0.0328) R2 : 0.697
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.37 (0.112) R2dC : 1.24 R2C : 0.466
β3 : -1.4 (0.108) R2dE : 0.235 R2E : -0.552
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.152 (0.0696) R2dN8 : 0.00437 R2N8 : -0.0113
σ : 0.607
deviance : 170.02
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C
peak time of C : 10.4
E
wheather : temperature
threshold : 20.56
memory length : 364
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 22.3
open length of G : 16.7

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
155.99 0.587 8.18 0.397 3.31 -1.32 -2.28 1.1 0.199 10.4 20.5 339 22.6 16.7
159.27 0.588 8.2 0.179 3.26 -1.28 -1.78 -- 0.107 10.4 20.6 341 22.5 16.8
170.37 0.608 8.18 0.114 3.47 -1.54 -- -0.136 0.155 10.4 20.6 344 22.7 16.4
169.63 0.607 8.2 0.116 3.36 -1.38 -- -- 0.166 10.4 20.54 345 22.4 16.8
235.54 0.715 8.36 -0.338 -- 2.21 -- -0.077 -0.408 -- 8.681 5248 20.5 13
216.46 0.69 8.27 -0.108 2.31 -- -1.84 -- -0.0499 10.5 -- -- -- --
230.19 0.71 8.28 -0.18 2.32 -- -- -- -0.0539 10.6 -- -- -- --
204.4 0.666 8.32 -0.183 -- 2.25 -- -- -0.0164 -- 6.632 5270 17.3 18.1
170.02 0.607 8.2 -- 3.37 -1.4 -- -- 0.152 10.4 20.56 364 22.3 16.7
559.84 1.11 8.34 -0.222 -- -- -- -- -0.0644 -- -- -- -- --
231.05 0.711 8.27 -- 2.32 -- -- -- -0.0339 10.6 -- -- -- --
203 0.664 8.32 -- -- 2.13 -- -- 0.0146 -- 6.099 5224 17.5 18.4
561.14 1.11 8.33 -- -- -- -- -- -0.0398 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 162.12 temperature 20 270 > th dose independent rect. 23 17
2 163.01 temperature 20 720 < th dose independent rect. 21 9
11 164.34 temperature 15 270 > th dose dependent rect. 23 17
12 164.51 temperature 25 720 < th dose dependent rect. 21 9
13 164.64 temperature 25 720 < th dose dependent rect. 22 7
29 165.47 temperature 20 720 < th dose independent sin 11 NA
41 166.25 temperature 20 720 < th dose independent rect. 23 4
57 166.80 temperature 25 720 < th dose dependent sin 11 NA
59 166.91 temperature 20 720 > th dose independent rect. 21 7
75 167.49 temperature 20 720 > th dose independent rect. 21 10
95 168.14 temperature 25 720 < th dose dependent rect. 23 4
98 168.23 temperature 20 720 > th dose independent rect. 21 12
152 169.35 temperature 20 720 > th dose independent sin 10 NA
174 169.76 temperature 20 720 > th dose dependent rect. 21 12
204 170.22 temperature 15 720 > th dose dependent rect. 21 7
257 171.04 temperature 20 720 > th dose independent rect. 16 17
277 171.41 temperature 30 270 < th dose dependent rect. 4 7
363 172.53 temperature 15 720 > th dose dependent sin 10 NA
378 172.77 temperature 20 720 > th dose independent rect. 12 21
509 174.07 humidity 90 14400 < th dose independent rect. 21 2
511 174.08 humidity 90 14400 > th dose independent rect. 21 2
594 174.83 humidity 90 14400 > th dose dependent rect. 21 3
605 174.93 humidity 90 14400 > th dose dependent rect. 22 1
615 175.04 humidity 90 14400 < th dose independent rect. 17 12
651 175.38 temperature 30 270 < th dose dependent sin 6 NA
671 175.49 humidity 90 14400 > th dose independent rect. 18 11
719 175.73 humidity 90 14400 < th dose independent rect. 18 7
850 176.40 humidity 90 14400 > th dose independent sin 12 NA
865 176.50 humidity 90 14400 < th dose independent sin 12 NA
915 176.70 humidity 90 14400 > th dose independent rect. 18 7