Os02g0232500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Receptor-like serine/threonine kinase.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0232500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Receptor-like serine/threonine kinase.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.99 | 0.407 | 7.3 | -0.743 | 0.733 | -1.23 | 0.233 | 5.07 | -0.416 | 19.1 | 25.89 | 4208 | -- | -- |
| 78.29 | 0.412 | 7.36 | -1.5 | 0.685 | -0.995 | 0.112 | -- | -0.295 | 18.6 | 16.69 | 8649 | -- | -- |
| 75.1 | 0.404 | 7.3 | -0.738 | 0.735 | -1.25 | -- | 5.23 | -0.43 | 19 | 26.09 | 4180 | -- | -- |
| 78.06 | 0.411 | 7.37 | -1.52 | 0.705 | -0.932 | -- | -- | -0.302 | 19 | 17.57 | 8503 | -- | -- |
| 103.41 | 0.474 | 7.28 | -0.758 | -- | -1.23 | -- | 5.1 | -0.43 | -- | 26 | 4255 | -- | -- |
| 95.44 | 0.458 | 7.45 | -2.11 | 0.729 | -- | 0.152 | -- | -0.645 | 18.7 | -- | -- | -- | -- |
| 95.49 | 0.458 | 7.45 | -2.11 | 0.73 | -- | -- | -- | -0.644 | 18.7 | -- | -- | -- | -- |
| 104.55 | 0.476 | 7.35 | -1.52 | -- | -0.959 | -- | -- | -0.307 | -- | 17.5 | 8560 | -- | -- |
| 88.61 | 0.438 | 7.27 | -- | 0.728 | -1.8 | -- | -- | 0.127 | 18.9 | 8.556 | 47520 | -- | -- |
| 123.28 | 0.519 | 7.43 | -2.13 | -- | -- | -- | -- | -0.659 | -- | -- | -- | -- | -- |
| 213.03 | 0.683 | 7.39 | -- | 0.757 | -- | -- | -- | -0.409 | 18.5 | -- | -- | -- | -- |
| 116.36 | 0.502 | 7.26 | -- | -- | -1.81 | -- | -- | 0.119 | -- | 8.268 | 47520 | -- | -- |
| 242.83 | 0.727 | 7.38 | -- | -- | -- | -- | -- | -0.423 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.05 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 19 |
| 4 | 70.84 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 2 | 6 |
| 5 | 71.06 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 6 | 71.13 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 18 | 13 |
| 13 | 71.77 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 51 | 73.00 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 59 | 73.11 | temperature | 15.0 | 720 | > th | dose dependent | sin | 10 | NA |
| 63 | 73.16 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 11 | 20 |
| 64 | 73.20 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 71 | 73.42 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 5 | 3 |
| 77 | 73.47 | radiation | 10.0 | 270 | < th | dose independent | rect. | 2 | 6 |
| 96 | 73.76 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 20 | 2 |
| 105 | 73.83 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 122 | 74.01 | humidity | 80.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 123 | 74.03 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 3 |
| 126 | 74.06 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 5 | 3 |
| 128 | 74.07 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 17 | 17 |
| 143 | 74.20 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 151 | 74.25 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 19 |
| 162 | 74.38 | temperature | 30.0 | 720 | < th | dose dependent | sin | 10 | NA |
| 165 | 74.39 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 167 | 74.40 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 177 | 74.45 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 21 | 13 |
| 193 | 74.54 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 222 | 74.70 | temperature | 20.0 | 270 | > th | dose independent | rect. | 2 | 19 |
| 243 | 74.82 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 18 | 11 |
| 254 | 74.86 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 263 | 74.89 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 294 | 75.00 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 17 |
| 300 | 75.03 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 357 | 75.18 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 22 | 2 |
| 359 | 75.18 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 395 | 75.31 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 5 |
| 396 | 75.32 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 22 | 2 |
| 399 | 75.33 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 402 | 75.33 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 12 | 19 |
| 404 | 75.34 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 409 | 75.36 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 15 | 21 |
| 412 | 75.37 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 6 | NA |
| 434 | 75.42 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 12 | 10 |
| 438 | 75.42 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 2 | 20 |
| 439 | 75.42 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 22 | 21 |
| 440 | 75.43 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 442 | 75.43 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 3 | 18 |
| 450 | 75.44 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 5 | 16 |
| 473 | 75.46 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 18 | 20 |
| 507 | 75.50 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 2 | 12 |
| 516 | 75.51 | wind | 7.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 527 | 75.52 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 5 |
| 530 | 75.52 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 564 | 75.54 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 11 | 23 |
| 567 | 75.55 | temperature | 25.0 | 4320 | > th | dose dependent | no | NA | NA |
| 580 | 75.55 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 5 | 23 |
| 600 | 75.57 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 602 | 75.57 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 603 | 75.57 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 605 | 75.57 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 608 | 75.57 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 630 | 75.58 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 642 | 75.59 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 19 | 3 |
| 656 | 75.60 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 684 | 75.62 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 775 | 75.68 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 793 | 75.69 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 12 | 19 |
| 797 | 75.70 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 19 | 3 |
| 802 | 75.71 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 819 | 75.72 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 22 | 18 |
| 884 | 75.77 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 885 | 75.77 | wind | 7.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 886 | 75.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 888 | 75.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 891 | 75.77 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 914 | 75.78 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 13 |
| 952 | 75.80 | wind | 7.0 | 43200 | > th | dose independent | rect. | 8 | 7 |
| 953 | 75.80 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 4 | 8 |
| 954 | 75.80 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 4 | 8 |
| 955 | 75.80 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 3 | 4 |
| 971 | 75.81 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 19 |
| 973 | 75.81 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 995 | 75.82 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 997 | 75.82 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 998 | 75.82 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |