Os02g0229600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Calponin-like actin-binding domain containing protein.
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Os02g0229600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Calponin-like actin-binding domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.87 | 0.387 | 2.84 | -0.125 | 0.0634 | -1.91 | -0.22 | -1.83 | 0.0486 | 6.06 | 8.999 | 9 | -- | -- |
| 68.57 | 0.386 | 2.85 | -0.132 | 0.0591 | -1.48 | -0.299 | -- | 0.0466 | 6.22 | 8.995 | 8 | -- | -- |
| 67.98 | 0.384 | 2.84 | -0.129 | 0.0618 | -1.88 | -- | -1.85 | 0.0485 | 6.63 | 8.972 | 8 | -- | -- |
| 68.58 | 0.386 | 2.83 | -0.133 | 0.0639 | -1.36 | -- | -- | 0.051 | 6.83 | 8.976 | 8 | -- | -- |
| 68.18 | 0.385 | 2.84 | -0.129 | -- | -1.86 | -- | -1.87 | 0.0491 | -- | 8.971 | 8 | -- | -- |
| 75.36 | 0.407 | 2.84 | -0.237 | 0.0603 | -- | -0.0262 | -- | 0.0107 | 10.9 | -- | -- | -- | -- |
| 75.36 | 0.407 | 2.84 | -0.238 | 0.0605 | -- | -- | -- | 0.0106 | 10.8 | -- | -- | -- | -- |
| 68.79 | 0.386 | 2.84 | -0.134 | -- | -1.34 | -- | -- | 0.0508 | -- | 8.938 | 8 | -- | -- |
| 69.03 | 0.387 | 2.83 | -- | 0.064 | -1.43 | -- | -- | 0.0664 | 6.78 | 8.998 | 8 | -- | -- |
| 75.59 | 0.406 | 2.85 | -0.24 | -- | -- | -- | -- | 0.0102 | -- | -- | -- | -- | -- |
| 76.86 | 0.41 | 2.84 | -- | 0.0625 | -- | -- | -- | 0.0372 | 11.1 | -- | -- | -- | -- |
| 69.25 | 0.388 | 2.83 | -- | -- | -1.41 | -- | -- | 0.0671 | -- | 8.972 | 8 | -- | -- |
| 77.1 | 0.41 | 2.84 | -- | -- | -- | -- | -- | 0.0368 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.20 | wind | 9 | 10 | > th | dose independent | rect. | 13 | 1 |
| 13 | 54.20 | wind | 9 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 74 | 62.97 | radiation | 10 | 10 | < th | dose independent | rect. | 14 | 1 |
| 96 | 65.73 | wind | 9 | 270 | > th | dose dependent | rect. | 21 | 17 |
| 108 | 65.98 | wind | 9 | 270 | > th | dose dependent | rect. | 1 | 13 |
| 124 | 66.15 | wind | 9 | 270 | > th | dose independent | rect. | 21 | 17 |
| 137 | 66.49 | wind | 9 | 270 | > th | dose independent | rect. | 1 | 13 |
| 236 | 67.43 | radiation | 10 | 90 | < th | dose independent | rect. | 12 | 5 |
| 243 | 67.46 | wind | 9 | 270 | > th | dose dependent | sin | 7 | NA |
| 261 | 67.64 | radiation | 1 | 270 | < th | dose dependent | rect. | 14 | 1 |
| 277 | 67.75 | radiation | 10 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 319 | 68.00 | wind | 9 | 270 | > th | dose independent | sin | 7 | NA |
| 328 | 68.10 | wind | 9 | 270 | < th | dose independent | sin | 7 | NA |
| 362 | 68.54 | wind | 7 | 90 | > th | dose independent | rect. | 12 | 14 |
| 363 | 68.55 | humidity | 80 | 30 | < th | dose independent | rect. | 13 | 1 |
| 383 | 68.66 | wind | 7 | 90 | > th | dose independent | rect. | 12 | 9 |
| 406 | 68.91 | radiation | 10 | 90 | < th | dose independent | rect. | 12 | 20 |
| 433 | 69.11 | temperature | 25 | 30 | > th | dose independent | rect. | 13 | 1 |
| 479 | 69.47 | wind | 5 | 10 | > th | dose dependent | rect. | 13 | 14 |
| 532 | 69.59 | wind | 7 | 10 | > th | dose dependent | rect. | 13 | 9 |
| 640 | 69.80 | radiation | 10 | 90 | < th | dose independent | rect. | 5 | 12 |
| 757 | 69.98 | wind | 9 | 10 | < th | dose independent | sin | 22 | NA |
| 767 | 70.00 | radiation | 10 | 10 | > th | dose independent | rect. | 6 | 1 |
| 798 | 70.00 | radiation | 10 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 854 | 70.05 | wind | 7 | 270 | < th | dose independent | rect. | 7 | 13 |
| 867 | 70.10 | radiation | 20 | 270 | < th | dose dependent | rect. | 10 | 6 |
| 960 | 70.34 | radiation | 20 | 270 | < th | dose dependent | rect. | 10 | 20 |