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Os02g0229400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Hexose transporter.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.9 (0.0231) R2 : 0.879
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.64 (0.0567) R2dC : 0.612 R2C : 0.733
β3 : -1.91 (0.0963) R2dE : 0.112 R2E : 0.23
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.518 (0.0487) R2dN8 : 0.0389 R2N8 : 0.0274
σ : 0.434
deviance : 86.75
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_____
C
peak time of C : 12.3
E
wheather : radiation
threshold : 4.243
memory length : 115
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 19.3
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
86.78 0.438 12.9 -0.112 2.65 -1.92 0.188 0.0839 -0.523 12.2 5.46 115 19.5 --
86.31 0.433 12.9 -0.127 2.65 -1.9 0.223 -- -0.544 12.4 4.494 115 19.3 --
86.36 0.433 12.9 -0.126 2.64 -1.9 -- -0.043 -0.53 12.3 4.221 115 19.3 --
86.36 0.433 12.9 -0.123 2.64 -1.91 -- -- -0.532 12.3 4.199 115 19.3 --
146.92 0.565 12.9 -0.101 -- -2.88 -- -0.355 -0.503 -- 62.35 26 5.07 --
148.73 0.572 12.9 -0.105 2.96 -- 0.378 -- -0.472 13 -- -- -- --
149.34 0.572 12.9 -0.0907 2.96 -- -- -- -0.47 13 -- -- -- --
147.4 0.565 12.9 -0.095 -- -2.88 -- -- -0.495 -- 65.16 26 5.07 --
86.75 0.434 12.9 -- 2.64 -1.91 -- -- -0.518 12.3 4.243 115 19.3 --
694.49 1.23 12.9 -0.201 -- -- -- -- -0.527 -- -- -- -- --
149.55 0.572 12.9 -- 2.96 -- -- -- -0.46 13 -- -- -- --
147.4 0.565 12.9 -- -- -2.83 -- -- -0.526 -- 50.71 79 5.56 --
695.55 1.23 12.9 -- -- -- -- -- -0.504 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 86.65 radiation 10.0 90 < th dose dependent rect. 3 17
5 89.27 radiation 1.0 270 < th dose independent rect. 24 19
11 90.36 precipitation 0.1 270 < th dose independent rect. 5 10
12 90.36 precipitation 0.1 270 < th dose dependent rect. 5 10
20 91.02 radiation 40.0 270 < th dose independent rect. 15 14
21 91.07 temperature 10.0 270 > th dose independent rect. 5 10
22 91.07 atmosphere 1015.0 270 < th dose independent rect. 5 10
23 91.07 temperature 10.0 270 > th dose independent rect. 15 14
27 91.56 atmosphere 995.0 270 > th dose independent rect. 5 10
37 92.50 wind 9.0 270 < th dose independent rect. 15 14
39 92.55 precipitation 0.1 270 < th dose independent rect. 19 6
40 92.55 precipitation 0.1 270 < th dose dependent rect. 19 6
41 92.65 wind 9.0 270 < th dose independent rect. 5 10
47 93.32 radiation 1.0 270 > th dose independent rect. 4 11
59 93.36 radiation 1.0 90 > th dose independent sin 1 NA
60 93.40 wind 9.0 270 < th dose independent rect. 19 6
62 93.42 temperature 30.0 270 < th dose independent rect. 20 14
63 93.47 temperature 10.0 270 > th dose independent rect. 19 6
64 93.47 temperature 30.0 270 < th dose independent rect. 19 6
65 93.47 humidity 50.0 270 > th dose independent rect. 19 6
66 93.47 atmosphere 995.0 270 > th dose independent rect. 19 6
67 93.47 radiation 1.0 270 < th dose independent rect. 19 6
72 93.47 temperature 10.0 270 > th dose independent rect. 1 18
73 93.47 atmosphere 1015.0 270 < th dose independent rect. 1 18
74 93.47 radiation 1.0 270 < th dose dependent rect. 19 6
88 93.68 radiation 1.0 90 < th dose independent sin 1 NA
90 93.72 wind 9.0 270 < th dose independent rect. 1 18
91 93.73 radiation 10.0 90 < th dose dependent sin 1 NA
168 95.31 radiation 10.0 270 < th dose dependent rect. 24 8
172 95.44 atmosphere 995.0 270 > th dose independent rect. 1 18
173 95.45 precipitation 0.1 270 < th dose independent rect. 6 18
174 95.45 precipitation 0.1 270 < th dose dependent rect. 6 18
179 95.61 wind 1.0 270 > th dose independent rect. 19 6
217 96.30 precipitation 0.1 270 < th dose independent rect. 5 20
218 96.30 precipitation 0.1 270 < th dose dependent rect. 5 20
226 96.53 temperature 10.0 270 > th dose dependent rect. 20 4
227 96.54 precipitation 0.1 270 < th dose independent rect. 20 14
228 96.54 precipitation 0.1 270 < th dose dependent rect. 20 14
234 96.70 radiation 30.0 90 < th dose dependent rect. 15 16
237 96.71 atmosphere 995.0 270 > th dose independent rect. 15 14
240 96.78 atmosphere 1015.0 270 < th dose independent rect. 19 5
242 96.91 radiation 10.0 270 < th dose independent rect. 24 6
270 97.24 radiation 1.0 270 < th dose independent rect. 1 9
296 97.55 precipitation 0.1 270 < th dose independent rect. 1 18
297 97.55 precipitation 0.1 270 < th dose dependent rect. 1 18
310 97.68 wind 9.0 270 < th dose dependent rect. 19 5
316 97.80 radiation 1.0 270 < th dose independent sin 3 NA
329 97.81 temperature 10.0 90 > th dose independent rect. 3 17
330 97.81 atmosphere 1015.0 90 < th dose independent rect. 3 17
342 97.89 atmosphere 1010.0 270 < th dose independent rect. 24 6
370 97.97 wind 9.0 270 < th dose dependent rect. 20 3
371 97.98 radiation 1.0 270 > th dose independent sin 3 NA
383 98.05 temperature 10.0 270 > th dose dependent rect. 24 6
411 98.14 temperature 10.0 270 > th dose dependent rect. 1 18
414 98.17 temperature 15.0 270 > th dose independent rect. 24 6
416 98.18 temperature 30.0 270 < th dose independent rect. 24 6
417 98.18 humidity 50.0 270 > th dose independent rect. 24 6
420 98.18 atmosphere 995.0 270 > th dose independent rect. 24 6
424 98.18 temperature 10.0 270 > th dose independent rect. 6 18
425 98.19 wind 9.0 270 < th dose independent rect. 24 6
466 98.56 wind 9.0 270 < th dose independent rect. 20 14
477 98.67 wind 1.0 270 > th dose independent rect. 10 10
483 98.68 temperature 10.0 270 > th dose independent rect. 10 10
484 98.68 atmosphere 1015.0 270 < th dose independent rect. 10 10
485 98.68 temperature 10.0 270 > th dose independent rect. 20 14
486 98.68 atmosphere 995.0 270 > th dose independent rect. 20 14
489 98.72 wind 9.0 270 < th dose independent rect. 6 18
513 98.91 humidity 50.0 270 > th dose independent rect. 20 14
531 99.16 wind 7.0 10 < th dose independent rect. 20 7
559 99.25 wind 9.0 270 < th dose independent rect. 10 10
568 99.30 precipitation 0.1 10 < th dose independent rect. 20 7
569 99.30 precipitation 0.1 10 < th dose dependent rect. 20 7
584 99.40 temperature 10.0 270 > th dose independent rect. 1 4
586 99.40 temperature 30.0 270 < th dose independent rect. 1 4
587 99.40 humidity 50.0 270 > th dose independent rect. 1 4
590 99.40 atmosphere 995.0 270 > th dose independent rect. 1 4
591 99.40 atmosphere 1010.0 270 < th dose independent rect. 1 4
596 99.40 temperature 10.0 270 > th dose independent rect. 5 20
597 99.41 wind 9.0 270 < th dose independent rect. 1 4
625 99.70 precipitation 0.1 270 < th dose independent rect. 24 6
626 99.70 temperature 10.0 10 > th dose independent rect. 20 7
627 99.70 temperature 30.0 10 < th dose independent rect. 20 7
628 99.70 humidity 50.0 10 > th dose independent rect. 20 7
631 99.70 atmosphere 995.0 10 > th dose independent rect. 20 7
632 99.70 radiation 1.0 10 < th dose independent rect. 20 7
637 99.70 temperature 10.0 10 > th dose independent rect. 3 17
639 99.70 atmosphere 1015.0 10 < th dose independent rect. 3 17
640 99.70 precipitation 0.1 270 < th dose dependent rect. 24 6
641 99.70 radiation 1.0 10 < th dose dependent rect. 20 7
668 99.93 humidity 50.0 270 > th dose dependent rect. 24 6
687 99.99 wind 9.0 270 < th dose independent rect. 5 20
720 100.22 radiation 10.0 90 < th dose dependent rect. 23 23
781 100.61 humidity 50.0 270 > th dose dependent rect. 20 4
844 100.99 precipitation 0.1 270 < th dose independent rect. 1 4
845 100.99 precipitation 0.1 270 < th dose dependent rect. 1 4
875 101.05 wind 1.0 270 > th dose independent rect. 1 18
900 101.17 humidity 50.0 270 > th dose dependent rect. 1 4