Os02g0228400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0228400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 172.51 | 0.617 | 6.38 | 4.04 | 0.0295 | -1.3 | 0.866 | 1.69 | 1 | 8.02 | 24.82 | 895 | -- | -- |
| 173.25 | 0.613 | 6.42 | 3.72 | 0.0768 | -1.13 | 0.713 | -- | 0.919 | 7.77 | 24.79 | 919 | -- | -- |
| 174.56 | 0.615 | 6.39 | 3.99 | 0.0564 | -1.26 | -- | 1.26 | 0.983 | 7.16 | 24.83 | 927 | -- | -- |
| 174.63 | 0.615 | 6.42 | 3.75 | 0.0473 | -1.18 | -- | -- | 0.922 | 9.28 | 24.71 | 894 | -- | -- |
| 174.53 | 0.615 | 6.4 | 3.93 | -- | -1.26 | -- | 0.96 | 0.974 | -- | 24.83 | 894 | -- | -- |
| 203.44 | 0.669 | 6.44 | 3.43 | 0.405 | -- | 0.826 | -- | 0.813 | 9.39 | -- | -- | -- | -- |
| 205.87 | 0.672 | 6.44 | 3.46 | 0.4 | -- | -- | -- | 0.815 | 9.68 | -- | -- | -- | -- |
| 174.69 | 0.616 | 6.42 | 3.74 | -- | -1.19 | -- | -- | 0.923 | -- | 24.74 | 871 | -- | -- |
| 515.3 | 1.06 | 6.53 | -- | 0.384 | -0.386 | -- | -- | 0.416 | 8.46 | 34.37 | 879 | -- | -- |
| 215.37 | 0.686 | 6.45 | 3.45 | -- | -- | -- | -- | 0.816 | -- | -- | -- | -- | -- |
| 520.76 | 1.07 | 6.52 | -- | 0.399 | -- | -- | -- | 0.43 | 9.02 | -- | -- | -- | -- |
| 520.24 | 1.06 | 6.55 | -- | -- | -0.592 | -- | -- | 0.38 | -- | 34.09 | 841 | -- | -- |
| 529.89 | 1.07 | 6.54 | -- | -- | -- | -- | -- | 0.433 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 164.29 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 6 | 166.13 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 10 | 166.94 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 13 | 167.48 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 10 |
| 17 | 167.54 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 18 | 167.83 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 27 | 169.15 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 31 | 169.71 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 32 | 169.89 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 40 | 170.35 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 17 | 1 |
| 46 | 170.57 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 60 | 171.10 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 13 | 14 |
| 63 | 171.12 | temperature | 25.0 | 720 | > th | dose dependent | sin | 17 | NA |
| 83 | 171.44 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 109 | 171.64 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 118 | 171.73 | wind | 9.0 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 165 | 172.41 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 13 | 6 |
| 173 | 172.55 | wind | 1.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 177 | 172.60 | temperature | 25.0 | 270 | > th | dose independent | rect. | 12 | 15 |
| 198 | 172.96 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 207 | 173.03 | wind | 5.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 210 | 173.05 | wind | 5.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 219 | 173.16 | wind | 9.0 | 14400 | > th | dose independent | rect. | 20 | 6 |
| 227 | 173.25 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 3 | 3 |
| 271 | 173.56 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 298 | 173.91 | wind | 1.0 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 303 | 173.96 | wind | 9.0 | 43200 | > th | dose dependent | sin | 12 | NA |
| 305 | 173.97 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 7 |
| 325 | 174.19 | temperature | 25.0 | 270 | < th | dose independent | rect. | 12 | 12 |
| 355 | 174.39 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 11 | 8 |
| 356 | 174.43 | wind | 7.0 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 375 | 174.63 | wind | 7.0 | 43200 | > th | dose independent | rect. | 14 | 18 |
| 376 | 174.64 | wind | 1.0 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 377 | 174.65 | wind | 7.0 | 43200 | > th | dose independent | rect. | 14 | 7 |
| 389 | 174.71 | wind | 7.0 | 43200 | < th | dose independent | rect. | 13 | 19 |
| 404 | 174.81 | wind | 7.0 | 43200 | < th | dose independent | rect. | 13 | 14 |
| 427 | 174.92 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 446 | 175.00 | wind | 7.0 | 43200 | > th | dose independent | rect. | 14 | 12 |
| 448 | 175.00 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 14 | 7 |
| 466 | 175.08 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 17 | 18 |
| 526 | 175.41 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 9 | 16 |
| 531 | 175.42 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 13 | 12 |
| 536 | 175.43 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 13 | 9 |
| 581 | 175.66 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 8 | 11 |
| 582 | 175.67 | wind | 7.0 | 43200 | < th | dose independent | sin | 16 | NA |
| 612 | 175.74 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 13 |
| 617 | 175.76 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 13 | 17 |
| 633 | 175.80 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 12 | 11 |
| 637 | 175.83 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 649 | 175.87 | wind | 7.0 | 43200 | > th | dose independent | sin | 15 | NA |
| 655 | 175.89 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 672 | 175.93 | temperature | 25.0 | 720 | > th | dose dependent | no | NA | NA |
| 730 | 176.10 | wind | 5.0 | 43200 | > th | dose dependent | sin | 17 | NA |
| 763 | 176.17 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 776 | 176.21 | wind | 1.0 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 785 | 176.23 | wind | 7.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 796 | 176.25 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 9 | 9 |
| 814 | 176.29 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 16 |
| 817 | 176.30 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 12 | 6 |
| 826 | 176.35 | wind | 9.0 | 43200 | > th | dose independent | sin | 12 | NA |
| 847 | 176.39 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 18 |
| 848 | 176.40 | wind | 7.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 890 | 176.49 | wind | 7.0 | 43200 | < th | dose independent | rect. | 13 | 3 |
| 896 | 176.50 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 4 | 2 |
| 898 | 176.51 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 9 |
| 947 | 176.65 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 963 | 176.69 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 13 |
| 976 | 176.73 | radiation | 1.0 | 720 | < th | dose dependent | sin | 19 | NA |
| 983 | 176.76 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 989 | 176.78 | wind | 5.0 | 43200 | > th | dose independent | rect. | 10 | 15 |
| 994 | 176.80 | wind | 7.0 | 43200 | < th | dose independent | rect. | 5 | 16 |