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Os02g0228300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 15.3 (0.0306) R2 : 0.608
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -2.2 (0.0942) R2dE : 0.528 R2E : 0.588
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.28 (0.0677) R2dN8 : 0.0204 R2N8 : 0.0806
σ : 0.567
deviance : 148.28
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 22.55
memory length : 47075
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
123.36 0.522 15.2 1.78 0.494 -1.73 -0.0263 -0.651 0.822 20.6 21.34 6489 -- --
123.53 0.518 15.2 1.77 0.488 -1.51 -0.021 -- 0.822 20.6 21.3 6517 -- --
123.28 0.517 15.2 1.75 0.489 -2.05 -- -1.3 0.837 20.5 20.77 6523 -- --
123.52 0.518 15.2 1.77 0.492 -1.5 -- -- 0.821 20.6 21.34 6517 -- --
136.92 0.545 15.2 1.77 -- -2.1 -- -1.39 0.829 -- 20.76 6537 -- --
143.32 0.561 15.1 2.51 0.513 -- -0.0494 -- 1.1 20.8 -- -- -- --
143.33 0.561 15.1 2.51 0.513 -- -- -- 1.1 20.8 -- -- -- --
137.25 0.546 15.2 1.75 -- -1.54 -- -- 0.807 -- 21.4 6529 -- --
135.04 0.541 15.3 -- 0.459 -2.12 -- -- 0.313 20.8 22.34 47377 -- --
158.25 0.588 15.1 2.51 -- -- -- -- 1.1 -- -- -- -- --
310.02 0.824 15.2 -- 0.509 -- -- -- 0.819 21.1 -- -- -- --
148.28 0.567 15.3 -- -- -2.2 -- -- 0.28 -- 22.55 47075 -- --
324.99 0.841 15.2 -- -- -- -- -- 0.816 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 117.04 wind 1.0 4320 < th dose independent rect. 6 1
2 117.33 wind 1.0 4320 < th dose dependent rect. 6 1
3 118.19 wind 1.0 4320 > th dose independent rect. 6 1
7 119.51 wind 1.0 43200 > th dose independent rect. 22 14
10 119.73 atmosphere 995.0 43200 > th dose independent rect. 20 18
15 119.88 atmosphere 995.0 43200 > th dose independent rect. 22 15
16 119.90 atmosphere 995.0 43200 < th dose independent rect. 21 16
25 119.94 wind 1.0 43200 < th dose independent rect. 19 18
27 119.97 wind 1.0 43200 < th dose independent rect. 21 16
30 120.00 wind 1.0 43200 > th dose independent rect. 17 19
37 120.16 atmosphere 995.0 43200 < th dose independent sin 7 NA
42 120.18 atmosphere 995.0 43200 < th dose dependent rect. 11 19
46 120.20 atmosphere 995.0 43200 < th dose independent rect. 23 13
52 120.27 atmosphere 995.0 43200 < th dose dependent sin 9 NA
59 120.33 wind 1.0 43200 < th dose dependent rect. 5 7
60 120.35 atmosphere 995.0 43200 > th dose independent rect. 1 10
62 120.36 atmosphere 995.0 43200 < th dose independent rect. 24 11
63 120.36 humidity 90.0 14400 > th dose dependent rect. 18 1
70 120.41 wind 1.0 43200 < th dose independent rect. 17 20
82 120.54 wind 1.0 43200 > th dose independent rect. 11 22
86 120.56 wind 1.0 43200 < th dose dependent rect. 22 20
87 120.56 atmosphere 995.0 43200 < th dose dependent rect. 13 20
88 120.57 atmosphere 995.0 43200 > th dose independent sin 6 NA
89 120.57 atmosphere 995.0 43200 > th dose independent rect. 2 8
95 120.59 atmosphere 995.0 43200 > th dose independent rect. 5 3
96 120.59 atmosphere 995.0 43200 < th dose dependent rect. 1 8
99 120.61 atmosphere 995.0 43200 < th dose independent rect. 2 8
102 120.65 atmosphere 995.0 43200 < th dose independent rect. 3 6
104 120.65 humidity 90.0 14400 > th dose dependent rect. 5 10
110 120.69 wind 1.0 43200 < th dose dependent rect. 3 21
111 120.70 wind 3.0 1440 < th dose dependent rect. 5 4
113 120.72 humidity 90.0 14400 > th dose dependent rect. 6 1
114 120.72 atmosphere 995.0 43200 < th dose dependent rect. 4 4
115 120.73 wind 1.0 14400 < th dose independent rect. 23 5
120 120.74 wind 3.0 43200 < th dose dependent rect. 6 1
124 120.78 atmosphere 995.0 43200 > th dose independent rect. 4 5
125 120.78 humidity 90.0 14400 > th dose dependent rect. 11 2
126 120.79 wind 1.0 43200 > th dose independent sin 6 NA
137 120.83 wind 1.0 43200 < th dose dependent rect. 16 22
150 120.88 wind 1.0 14400 > th dose independent rect. 24 4
165 120.96 wind 1.0 43200 < th dose dependent rect. 9 23
169 120.97 wind 1.0 43200 < th dose dependent rect. 1 23
175 121.03 wind 3.0 43200 < th dose dependent rect. 5 4
180 121.06 humidity 90.0 14400 > th dose independent rect. 11 2
181 121.07 wind 1.0 43200 < th dose dependent rect. 21 17
187 121.09 wind 1.0 43200 < th dose dependent rect. 24 14
195 121.14 wind 1.0 43200 > th dose independent rect. 14 21
197 121.15 atmosphere 995.0 43200 < th dose dependent rect. 12 15
207 121.18 humidity 70.0 14400 > th dose dependent rect. 6 1
212 121.19 wind 1.0 43200 < th dose dependent no NA NA
217 121.21 humidity 90.0 14400 < th dose independent rect. 6 1
225 121.25 atmosphere 995.0 43200 < th dose independent rect. 5 3
231 121.27 humidity 90.0 14400 > th dose independent rect. 6 1
243 121.30 atmosphere 995.0 43200 < th dose dependent rect. 21 13
252 121.34 humidity 90.0 14400 > th dose dependent rect. 11 4
256 121.35 wind 1.0 43200 < th dose independent rect. 10 23
275 121.41 wind 1.0 43200 < th dose dependent sin 4 NA
279 121.43 humidity 70.0 43200 < th dose dependent rect. 7 1
299 121.51 wind 1.0 43200 < th dose dependent rect. 12 23
367 121.85 wind 1.0 43200 < th dose independent rect. 11 20
370 121.85 humidity 90.0 14400 > th dose dependent sin 1 NA
380 121.91 humidity 70.0 43200 < th dose independent rect. 23 9
383 121.92 humidity 70.0 43200 > th dose independent rect. 23 9
412 122.04 humidity 90.0 14400 > th dose independent rect. 11 4
415 122.04 wind 1.0 43200 > th dose independent rect. 3 9
419 122.05 wind 3.0 43200 < th dose dependent rect. 22 2
444 122.15 wind 5.0 14400 > th dose independent rect. 8 2
452 122.21 wind 1.0 43200 < th dose dependent rect. 7 23
479 122.34 wind 1.0 14400 > th dose independent rect. 24 2
480 122.34 atmosphere 995.0 43200 < th dose dependent sin 16 NA
482 122.35 humidity 90.0 14400 < th dose independent rect. 11 4
489 122.38 wind 5.0 14400 < th dose independent rect. 9 1
506 122.44 wind 7.0 14400 > th dose dependent rect. 23 2
517 122.51 humidity 90.0 14400 < th dose independent rect. 11 2
522 122.53 humidity 90.0 14400 > th dose independent rect. 2 14
548 122.62 wind 7.0 14400 < th dose independent rect. 23 2
570 122.68 wind 7.0 43200 > th dose dependent rect. 18 2
579 122.73 humidity 60.0 43200 > th dose independent rect. 20 13
586 122.75 humidity 90.0 43200 < th dose dependent rect. 6 1
603 122.79 wind 1.0 43200 > th dose independent rect. 3 12
612 122.82 humidity 90.0 14400 > th dose dependent rect. 14 1
627 122.87 wind 9.0 14400 < th dose independent rect. 22 6
631 122.88 precipitation 0.1 43200 > th dose independent rect. 24 8
634 122.90 precipitation 0.1 43200 < th dose independent rect. 24 8
637 122.90 precipitation 0.1 43200 < th dose dependent rect. 24 8
639 122.91 wind 1.0 43200 < th dose independent no NA NA
642 122.92 humidity 50.0 14400 > th dose dependent rect. 2 6
652 122.95 precipitation 0.1 43200 > th dose dependent rect. 24 8
667 122.99 temperature 20.0 720 > th dose independent rect. 1 6
674 123.01 humidity 80.0 14400 > th dose dependent rect. 3 5
680 123.03 wind 1.0 43200 > th dose independent rect. 22 23
681 123.03 wind 1.0 43200 < th dose independent rect. 22 23
701 123.08 wind 1.0 43200 < th dose independent rect. 3 23
705 123.11 wind 7.0 14400 > th dose independent rect. 23 2
712 123.12 wind 3.0 43200 < th dose independent rect. 22 1
714 123.12 precipitation 0.1 43200 > th dose dependent rect. 7 6
723 123.14 precipitation 0.1 43200 > th dose independent rect. 7 6
730 123.15 wind 1.0 43200 < th dose dependent rect. 3 15
749 123.21 wind 1.0 43200 > th dose independent no NA NA
762 123.24 precipitation 0.1 43200 < th dose independent rect. 7 6
768 123.24 precipitation 0.1 43200 < th dose dependent rect. 7 6
773 123.25 precipitation 0.1 43200 > th dose independent rect. 10 1
775 123.25 precipitation 0.1 43200 > th dose dependent rect. 10 1
792 123.29 temperature 20.0 720 > th dose independent rect. 23 8
794 123.29 wind 1.0 43200 < th dose independent rect. 8 23
802 123.30 humidity 60.0 43200 < th dose independent rect. 20 13
810 123.32 precipitation 0.1 43200 < th dose independent rect. 10 1
812 123.32 precipitation 0.1 43200 < th dose dependent rect. 10 1
822 123.35 wind 1.0 43200 > th dose independent rect. 1 23
825 123.36 humidity 90.0 43200 < th dose independent rect. 4 2
829 123.36 wind 1.0 14400 < th dose dependent rect. 23 5
845 123.41 wind 3.0 43200 < th dose independent rect. 19 5
855 123.42 precipitation 0.1 43200 > th dose independent rect. 10 3
862 123.42 precipitation 0.1 43200 > th dose dependent rect. 10 3
865 123.43 temperature 20.0 720 > th dose independent sin 8 NA
866 123.43 wind 1.0 43200 < th dose independent rect. 5 23
868 123.44 temperature 20.0 720 > th dose independent rect. 5 1
871 123.44 wind 1.0 43200 > th dose dependent rect. 22 1
881 123.47 wind 1.0 43200 < th dose independent sin 5 NA
887 123.49 humidity 70.0 43200 > th dose independent rect. 5 2
891 123.49 wind 3.0 14400 > th dose dependent rect. 8 2
897 123.50 humidity 90.0 14400 < th dose independent rect. 2 14
900 123.51 wind 3.0 43200 > th dose independent rect. 19 5
926 123.57 humidity 60.0 43200 < th dose independent rect. 7 1
935 123.59 humidity 70.0 43200 < th dose independent rect. 5 2
972 123.67 precipitation 0.1 43200 < th dose independent rect. 10 3
974 123.67 precipitation 0.1 43200 < th dose dependent rect. 10 3
979 123.68 temperature 20.0 720 > th dose independent rect. 22 16
980 123.68 temperature 20.0 14400 < th dose dependent rect. 6 3
984 123.69 precipitation 0.1 43200 > th dose independent rect. 12 1
989 123.69 precipitation 0.1 43200 > th dose dependent rect. 12 1
992 123.70 humidity 90.0 14400 > th dose independent sin 2 NA