Os02g0227000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function UPF0054 family protein.
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Os02g0227000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function UPF0054 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 125.21 | 0.526 | 7.77 | 0.383 | 0.932 | -2.01 | 0.178 | 0.352 | -0.303 | 11.2 | 3.36 | 264 | 23.2 | -- |
| 125.46 | 0.522 | 7.77 | 0.366 | 0.929 | -1.98 | 0.148 | -- | -0.308 | 11.3 | 3.328 | 260 | 23.1 | -- |
| 125.33 | 0.521 | 7.77 | 0.386 | 0.937 | -1.99 | -- | 0.329 | -0.302 | 11.3 | 3.286 | 264 | 23.1 | -- |
| 125.53 | 0.522 | 7.77 | 0.377 | 0.939 | -2 | -- | -- | -0.304 | 11.3 | 3.332 | 260 | 23 | -- |
| 143 | 0.557 | 7.79 | 0.43 | -- | -1.96 | -- | 0.136 | -0.315 | -- | 5.978 | 232 | 2.35 | -- |
| 170.76 | 0.613 | 7.8 | 0.423 | 1.93 | -- | 0.0387 | -- | -0.308 | 15 | -- | -- | -- | -- |
| 170.76 | 0.612 | 7.8 | 0.424 | 1.93 | -- | -- | -- | -0.308 | 15 | -- | -- | -- | -- |
| 143.05 | 0.557 | 7.8 | 0.43 | -- | -1.95 | -- | -- | -0.322 | -- | 6.345 | 232 | 2.41 | -- |
| 129.26 | 0.53 | 7.78 | -- | 0.944 | -2.01 | -- | -- | -0.345 | 11.3 | 3.051 | 264 | 22.9 | -- |
| 384.46 | 0.916 | 7.81 | 0.341 | -- | -- | -- | -- | -0.358 | -- | -- | -- | -- | -- |
| 175.49 | 0.62 | 7.81 | -- | 1.92 | -- | -- | -- | -0.355 | 15 | -- | -- | -- | -- |
| 147.75 | 0.566 | 7.81 | -- | -- | -1.96 | -- | -- | -0.368 | -- | 4.311 | 245 | 2.33 | -- |
| 387.54 | 0.919 | 7.81 | -- | -- | -- | -- | -- | -0.396 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 112.11 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 2 | 112.60 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 17 | 8 |
| 14 | 117.39 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 19 | 7 |
| 21 | 118.17 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 19 |
| 22 | 118.25 | temperature | 20.0 | 30 | > th | dose independent | rect. | 12 | 20 |
| 25 | 118.48 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 17 |
| 55 | 121.12 | wind | 5.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 62 | 121.54 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 18 |
| 64 | 121.86 | wind | 9.0 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 71 | 122.11 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 9 |
| 72 | 122.22 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 74 | 122.27 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 6 |
| 83 | 122.42 | wind | 5.0 | 90 | < th | dose dependent | rect. | 2 | 5 |
| 93 | 122.65 | wind | 9.0 | 10 | < th | dose dependent | rect. | 2 | 6 |
| 95 | 122.76 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 6 |
| 97 | 122.76 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 98 | 122.87 | wind | 9.0 | 10 | < th | dose independent | rect. | 8 | 18 |
| 104 | 122.99 | temperature | 15.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 105 | 123.00 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 108 | 123.03 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 109 | 123.03 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 112 | 123.03 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 113 | 123.03 | radiation | 20.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 116 | 123.03 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 18 |
| 122 | 123.18 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 12 |
| 125 | 123.22 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 24 | 14 |
| 137 | 123.43 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 12 |
| 140 | 123.49 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 158 | 123.68 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 159 | 123.71 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 2 | 6 |
| 160 | 123.71 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 2 | 6 |
| 161 | 123.73 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 18 |
| 162 | 123.73 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 24 | 7 |
| 163 | 123.73 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 18 |
| 170 | 123.85 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 172 | 123.85 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 173 | 123.85 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 176 | 123.85 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 177 | 123.85 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 179 | 123.85 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 183 | 123.85 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 198 | 123.91 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 199 | 123.91 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 14 | 17 |
| 204 | 123.97 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 212 | 124.02 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 216 | 124.07 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 228 | 124.19 | wind | 9.0 | 10 | < th | dose independent | rect. | 2 | 6 |
| 229 | 124.19 | temperature | 10.0 | 10 | > th | dose independent | rect. | 2 | 6 |
| 231 | 124.19 | temperature | 30.0 | 10 | < th | dose independent | rect. | 2 | 6 |
| 232 | 124.19 | humidity | 50.0 | 10 | > th | dose independent | rect. | 2 | 6 |
| 234 | 124.19 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 2 | 6 |
| 235 | 124.19 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 2 | 6 |
| 236 | 124.19 | temperature | 10.0 | 10 | > th | dose independent | rect. | 8 | 18 |
| 255 | 124.59 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 20 |
| 256 | 124.59 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 296 | 125.10 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 12 | 17 |
| 355 | 125.42 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 379 | 125.59 | radiation | 40.0 | 10 | < th | dose independent | rect. | 2 | 6 |
| 384 | 125.62 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 391 | 125.67 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 18 |
| 400 | 125.78 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 18 |
| 401 | 125.78 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 18 |
| 405 | 125.83 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 18 |
| 409 | 125.91 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 6 |
| 410 | 125.91 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 6 |
| 413 | 125.91 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 6 |
| 415 | 125.91 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 6 |
| 416 | 125.91 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 18 |
| 431 | 126.04 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 24 | 6 |
| 432 | 126.05 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 445 | 126.16 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 5 |
| 449 | 126.27 | wind | 7.0 | 270 | < th | dose independent | rect. | 20 | 15 |
| 471 | 126.55 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 2 | 6 |
| 542 | 127.00 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 5 |
| 552 | 127.09 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 15 | 10 |
| 557 | 127.14 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 2 | 6 |
| 588 | 127.29 | radiation | 1.0 | 270 | < th | dose dependent | sin | 5 | NA |
| 592 | 127.31 | temperature | 10.0 | 270 | > th | dose independent | rect. | 10 | 10 |
| 593 | 127.31 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 10 | 10 |
| 594 | 127.31 | temperature | 10.0 | 270 | > th | dose independent | rect. | 20 | 14 |
| 595 | 127.31 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 20 | 14 |
| 596 | 127.32 | radiation | 1.0 | 270 | > th | dose independent | sin | 5 | NA |
| 597 | 127.32 | wind | 7.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 609 | 127.42 | humidity | 50.0 | 270 | > th | dose independent | rect. | 20 | 14 |
| 619 | 127.47 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 19 |
| 626 | 127.52 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 2 | 6 |
| 644 | 127.62 | wind | 5.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 650 | 127.65 | wind | 5.0 | 270 | < th | dose independent | rect. | 6 | 5 |
| 670 | 127.78 | wind | 1.0 | 30 | > th | dose independent | rect. | 8 | 18 |
| 682 | 127.88 | radiation | 1.0 | 270 | < th | dose independent | sin | 5 | NA |
| 684 | 127.88 | radiation | 1.0 | 270 | < th | dose independent | rect. | 15 | 10 |
| 685 | 127.88 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 8 | 18 |
| 715 | 128.17 | radiation | 40.0 | 270 | < th | dose independent | rect. | 12 | 17 |
| 718 | 128.18 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 2 | 6 |
| 726 | 128.27 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 18 |
| 750 | 128.37 | wind | 1.0 | 270 | > th | dose independent | rect. | 10 | 10 |
| 866 | 128.88 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 9 |
| 872 | 128.88 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 9 |
| 889 | 129.03 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 922 | 129.17 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 5 |
| 928 | 129.18 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 24 | 6 |
| 963 | 129.35 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 11 | 9 |
| 966 | 129.36 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 2 | 6 |