Os02g0223200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase- like protein (Fragment).
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Os02g0223200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase- like protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 92.47 | 0.452 | 7.63 | 2.51 | 1.88 | 0.852 | -0.559 | 1.67 | 0.588 | 0.725 | 21.4 | 1710 | -- | -- |
| 99.2 | 0.464 | 7.69 | 2.12 | 1.84 | 0.819 | -0.752 | -- | 0.479 | 0.7 | 21.8 | 1950 | -- | -- |
| 93.79 | 0.451 | 7.63 | 2.53 | 1.88 | 0.858 | -- | 1.68 | 0.59 | 0.709 | 21.47 | 1710 | -- | -- |
| 99.84 | 0.465 | 7.7 | 2.06 | 1.88 | 0.776 | -- | -- | 0.469 | 0.713 | 21.6 | 1882 | -- | -- |
| 289.4 | 0.792 | 7.59 | 2.65 | -- | 1.24 | -- | 1.97 | 0.559 | -- | 21.8 | 955 | -- | -- |
| 114.52 | 0.502 | 7.64 | 2.39 | 1.88 | -- | -0.62 | -- | 0.701 | 0.706 | -- | -- | -- | -- |
| 116.15 | 0.505 | 7.64 | 2.41 | 1.88 | -- | -- | -- | 0.704 | 0.683 | -- | -- | -- | -- |
| 251.73 | 0.739 | 7.73 | 2.02 | -- | 1.48 | -- | -- | 0.203 | -- | 24.84 | 948 | -- | -- |
| 119.15 | 0.508 | 7.82 | -- | 1.85 | 1.89 | -- | -- | -0.0663 | 0.681 | 19.16 | 47520 | -- | -- |
| 337.1 | 0.858 | 7.61 | 2.48 | -- | -- | -- | -- | 0.738 | -- | -- | -- | -- | -- |
| 269.77 | 0.768 | 7.7 | -- | 1.92 | -- | -- | -- | 0.435 | 0.743 | -- | -- | -- | -- |
| 331.98 | 0.849 | 7.79 | -- | -- | 1.99 | -- | -- | -0.0744 | -- | 19.36 | 47520 | -- | -- |
| 499.52 | 1.04 | 7.67 | -- | -- | -- | -- | -- | 0.462 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 91.51 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 2 | 91.59 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 3 | 92.65 | temperature | 25 | 270 | < th | dose dependent | rect. | 4 | 21 |
| 11 | 93.45 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 12 | 93.49 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 17 | 93.79 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 19 | 93.89 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 57 | 94.50 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 8 |
| 133 | 95.04 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 7 |
| 142 | 95.11 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 148 | 95.14 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 194 | 95.27 | temperature | 25 | 270 | < th | dose dependent | rect. | 15 | 21 |
| 217 | 95.33 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 18 |
| 281 | 95.52 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 7 |
| 288 | 95.53 | temperature | 15 | 1440 | > th | dose dependent | rect. | 22 | 3 |
| 302 | 95.55 | temperature | 15 | 1440 | > th | dose dependent | rect. | 22 | 5 |
| 305 | 95.56 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 335 | 95.61 | temperature | 20 | 270 | > th | dose independent | rect. | 12 | 17 |
| 346 | 95.63 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 8 |
| 358 | 95.65 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 370 | 95.67 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 379 | 95.68 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 9 |
| 387 | 95.68 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 23 |
| 420 | 95.73 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 9 |
| 444 | 95.76 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 3 |
| 450 | 95.77 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 6 |
| 451 | 95.77 | temperature | 20 | 10 | > th | dose independent | rect. | 15 | 14 |
| 480 | 95.81 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 3 |
| 529 | 95.87 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 6 |
| 561 | 95.91 | temperature | 25 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 742 | 96.25 | temperature | 20 | 4320 | > th | dose independent | sin | 19 | NA |
| 778 | 96.31 | temperature | 30 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 783 | 96.32 | temperature | 20 | 1440 | > th | dose independent | sin | 11 | NA |
| 789 | 96.33 | temperature | 20 | 4320 | < th | dose independent | sin | 19 | NA |
| 802 | 96.34 | temperature | 20 | 270 | > th | dose independent | rect. | 11 | 20 |
| 922 | 96.53 | temperature | 15 | 10 | > th | dose dependent | rect. | 15 | 14 |
| 933 | 96.55 | temperature | 20 | 1440 | < th | dose independent | sin | 11 | NA |