Os02g0221900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os02g0221900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 365.68 | 0.898 | 10.9 | 0.00832 | 1.31 | 2.89 | 0.883 | -7.31 | -0.36 | 0.791 | 23.7 | 1620 | -- | -- |
| 381.29 | 0.909 | 10.7 | 1.81 | 1.28 | 2.28 | 0.597 | -- | -0.0163 | 0.777 | 22.13 | 6276 | -- | -- |
| 368.99 | 0.895 | 10.9 | 0.00543 | 1.31 | 2.89 | -- | -7.21 | -0.355 | 0.789 | 23.7 | 1620 | -- | -- |
| 383.05 | 0.912 | 10.7 | 1.78 | 1.25 | 2.28 | -- | -- | -0.00201 | 0.588 | 22.1 | 6279 | -- | -- |
| 413.22 | 0.947 | 10.8 | 0.262 | -- | 3.41 | -- | -6.87 | -0.369 | -- | 23 | 1048 | -- | -- |
| 566.21 | 1.12 | 10.5 | 2.87 | 1.35 | -- | 0.927 | -- | 0.614 | 0.422 | -- | -- | -- | -- |
| 569.91 | 1.12 | 10.5 | 2.83 | 1.35 | -- | -- | -- | 0.61 | 0.388 | -- | -- | -- | -- |
| 433.05 | 0.969 | 10.6 | 2.03 | -- | 2.83 | -- | -- | 0.129 | -- | 22.9 | 1020 | -- | -- |
| 424.58 | 0.96 | 10.8 | -- | 1.14 | 3.37 | -- | -- | -0.681 | 0.311 | 17.29 | 9538 | -- | -- |
| 684.3 | 1.22 | 10.5 | 2.88 | -- | -- | -- | -- | 0.631 | -- | -- | -- | -- | -- |
| 781.29 | 1.31 | 10.6 | -- | 1.39 | -- | -- | -- | 0.294 | 0.493 | -- | -- | -- | -- |
| 508.61 | 1.05 | 10.8 | -- | -- | 3.58 | -- | -- | -0.667 | -- | 17.1 | 8188 | -- | -- |
| 902.74 | 1.4 | 10.6 | -- | -- | -- | -- | -- | 0.312 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 362.91 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 4 | 369.56 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 9 |
| 13 | 370.20 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 30 | 370.85 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 42 | 371.31 | temperature | 25 | 1440 | > th | dose dependent | sin | 22 | NA |
| 149 | 374.28 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 176 | 374.65 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 177 | 374.66 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 187 | 374.89 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 209 | 375.53 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 3 |
| 217 | 375.80 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 227 | 376.19 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 242 | 376.86 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 21 |
| 246 | 377.05 | temperature | 25 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 258 | 377.57 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 19 |
| 261 | 377.72 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 5 |
| 266 | 378.00 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 5 |
| 285 | 378.64 | radiation | 1 | 1440 | < th | dose dependent | sin | 1 | NA |
| 293 | 379.15 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 20 |
| 308 | 379.43 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 17 |
| 316 | 379.48 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 321 | 379.53 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 5 |
| 326 | 379.59 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 327 | 379.59 | radiation | 1 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 335 | 379.69 | radiation | 1 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 389 | 380.27 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 413 | 380.75 | temperature | 25 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 444 | 381.86 | radiation | 1 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 457 | 382.24 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 7 |
| 482 | 383.15 | radiation | 40 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 497 | 383.86 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 17 |
| 555 | 385.54 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 18 |
| 561 | 385.68 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 576 | 385.98 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 10 |
| 578 | 386.12 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 587 | 386.51 | radiation | 40 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 604 | 387.09 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 8 |
| 606 | 387.16 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 3 |
| 648 | 388.08 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 664 | 388.40 | radiation | 20 | 43200 | < th | dose independent | rect. | 17 | 16 |
| 669 | 388.49 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 8 |
| 684 | 388.73 | temperature | 25 | 30 | > th | dose dependent | sin | 17 | NA |
| 692 | 388.83 | radiation | 10 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 694 | 388.87 | radiation | 10 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 838 | 390.40 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 2 |
| 844 | 390.51 | temperature | 25 | 4320 | > th | dose independent | rect. | 4 | 14 |
| 851 | 390.58 | temperature | 25 | 4320 | > th | dose independent | sin | 2 | NA |
| 876 | 390.81 | radiation | 40 | 43200 | < th | dose independent | rect. | 15 | 20 |
| 878 | 390.85 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 12 |
| 886 | 390.91 | temperature | 25 | 4320 | < th | dose independent | rect. | 4 | 14 |
| 948 | 391.41 | radiation | 40 | 43200 | < th | dose independent | rect. | 1 | 10 |
| 952 | 391.43 | radiation | 40 | 43200 | < th | dose independent | rect. | 4 | 7 |
| 957 | 391.45 | radiation | 40 | 43200 | < th | dose independent | rect. | 6 | 5 |
| 979 | 391.54 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 989 | 391.63 | radiation | 1 | 1440 | < th | dose dependent | sin | 14 | NA |