Os02g0221600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0221600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.98 | 0.312 | 10.2 | -0.821 | 1.02 | -0.918 | 0.00595 | -0.296 | 0.176 | 2.97 | 24.54 | 547 | -- | -- |
| 44.1 | 0.309 | 10.2 | -0.869 | 1.02 | -0.888 | 0.0051 | -- | 0.166 | 2.96 | 24.6 | 544 | -- | -- |
| 43.98 | 0.309 | 10.2 | -0.821 | 1.02 | -0.919 | -- | -0.297 | 0.176 | 2.97 | 24.5 | 543 | -- | -- |
| 44.1 | 0.309 | 10.2 | -0.871 | 1.02 | -0.889 | -- | -- | 0.166 | 2.97 | 24.6 | 544 | -- | -- |
| 91.94 | 0.447 | 10.2 | -0.865 | -- | -1.19 | -- | -0.43 | 0.201 | -- | 33.13 | 1087 | -- | -- |
| 55.61 | 0.35 | 10.2 | -0.632 | 1.01 | -- | 0.0132 | -- | 0.342 | 2.58 | -- | -- | -- | -- |
| 55.61 | 0.349 | 10.2 | -0.633 | 1.01 | -- | -- | -- | 0.342 | 2.58 | -- | -- | -- | -- |
| 91.29 | 0.445 | 10.2 | -0.948 | -- | -1.21 | -- | -- | 0.157 | -- | 57.17 | 1096 | -- | -- |
| 61.71 | 0.366 | 10.2 | -- | 1.02 | -0.529 | -- | -- | 0.328 | 2.79 | 24.49 | 494 | -- | -- |
| 115.87 | 0.503 | 10.2 | -0.589 | -- | -- | -- | -- | 0.367 | -- | -- | -- | -- | -- |
| 66.16 | 0.38 | 10.2 | -- | 1 | -- | -- | -- | 0.412 | 2.57 | -- | -- | -- | -- |
| 112.11 | 0.493 | 10.2 | -- | -- | -0.826 | -- | -- | 0.317 | -- | 58.41 | 1083 | -- | -- |
| 125.03 | 0.522 | 10.2 | -- | -- | -- | -- | -- | 0.433 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.99 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 2 | 37.54 | temperature | 20.0 | 270 | > th | dose independent | rect. | 2 | 17 |
| 4 | 37.76 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 11 | 38.68 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 33 | 40.07 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 47 | 40.66 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 16 |
| 53 | 40.96 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 18 |
| 55 | 40.98 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 59 | 41.04 | humidity | 80.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 60 | 41.05 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 63 | 41.15 | temperature | 20.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 66 | 41.17 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 14 |
| 70 | 41.23 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 18 |
| 71 | 41.23 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 18 |
| 76 | 41.33 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 79 | 41.38 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 85 | 41.47 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 89 | 41.50 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 94 | 41.54 | humidity | 80.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 113 | 41.69 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 3 | 5 |
| 117 | 41.73 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 120 | 41.74 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 17 | 14 |
| 132 | 41.85 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 136 | 41.88 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 138 | 41.88 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 139 | 41.88 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 141 | 41.88 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 144 | 41.88 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 148 | 41.89 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 150 | 41.89 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 22 |
| 151 | 41.89 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 152 | 41.90 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 6 |
| 153 | 41.90 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 155 | 41.91 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 163 | 41.96 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 18 | 8 |
| 165 | 41.98 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 8 |
| 168 | 41.98 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 3 | 6 |
| 170 | 41.98 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 8 |
| 182 | 42.06 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 17 |
| 191 | 42.11 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 197 | 42.18 | radiation | 1.0 | 270 | < th | dose independent | rect. | 18 | 8 |
| 204 | 42.20 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 8 |
| 206 | 42.20 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 210 | 42.20 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 213 | 42.21 | wind | 7.0 | 270 | < th | dose independent | rect. | 18 | 8 |
| 220 | 42.24 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 8 |
| 221 | 42.24 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 13 | 20 |
| 225 | 42.26 | humidity | 60.0 | 270 | > th | dose independent | rect. | 18 | 8 |
| 226 | 42.26 | radiation | 20.0 | 90 | < th | dose independent | rect. | 13 | 18 |
| 238 | 42.28 | temperature | 10.0 | 720 | > th | dose dependent | sin | 12 | NA |
| 241 | 42.29 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 244 | 42.30 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 8 |
| 251 | 42.32 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 257 | 42.35 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 258 | 42.35 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 259 | 42.35 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 260 | 42.35 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 263 | 42.36 | radiation | 40.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 272 | 42.39 | radiation | 20.0 | 90 | < th | dose independent | rect. | 15 | 16 |
| 273 | 42.39 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 287 | 42.42 | humidity | 80.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 314 | 42.47 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 8 |
| 316 | 42.47 | radiation | 20.0 | 270 | < th | dose independent | rect. | 18 | 8 |
| 320 | 42.47 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 16 |
| 324 | 42.49 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 341 | 42.53 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 447 | 42.66 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 515 | 42.85 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 517 | 42.85 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 536 | 42.89 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 537 | 42.89 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 539 | 42.89 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 540 | 42.89 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 543 | 42.89 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 544 | 42.89 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 549 | 42.89 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 601 | 42.96 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 2 |
| 602 | 42.96 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 607 | 42.97 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 608 | 42.97 | temperature | 30.0 | 720 | < th | dose dependent | sin | 12 | NA |
| 620 | 42.98 | humidity | 80.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 626 | 42.99 | wind | 1.0 | 270 | > th | dose independent | rect. | 18 | 8 |
| 633 | 43.00 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 651 | 43.04 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 660 | 43.07 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 16 |
| 664 | 43.07 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 17 | 15 |
| 665 | 43.07 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 16 |
| 704 | 43.12 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 16 |
| 727 | 43.16 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 768 | 43.23 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 12 |
| 798 | 43.28 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 810 | 43.31 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 844 | 43.35 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 18 |
| 848 | 43.35 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 18 |
| 857 | 43.37 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 869 | 43.39 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 19 | 6 |
| 894 | 43.41 | radiation | 10.0 | 10 | < th | dose independent | rect. | 3 | 19 |
| 901 | 43.42 | radiation | 1.0 | 90 | > th | dose independent | rect. | 7 | 10 |
| 918 | 43.43 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 953 | 43.49 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 19 | 8 |
| 957 | 43.49 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 20 |