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Os02g0221400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Non-protein coding transcript, uncharacterized transcript.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.3 (0.0254) R2 : 0.74
β1 : -1.5 (0.0931) R2dD : 0.153 R2D : 0.112
β2 : 2.12 (0.0661) R2dC : 0.593 R2C : 0.563
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.458 (0.0543) R2dN8 : 0.0544 R2N8 : 0.00167
σ : 0.478
deviance : 104.21
__
_____
C
peak time of C : 6.78
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
90.57 0.447 8.3 -1.49 2.24 -0.914 -0.411 0.371 -0.465 7.57 4.597 10 -- --
90.85 0.444 8.3 -1.48 2.24 -0.921 -0.281 -- -0.464 7.57 4.748 9 -- --
90.98 0.444 8.3 -1.49 2.24 -0.922 -- 0.217 -0.463 7.59 4.626 9 -- --
91.06 0.444 8.3 -1.49 2.24 -0.928 -- -- -0.463 7.59 4.741 9 -- --
336.64 0.855 8.35 -1.47 -- -0.344 -- 0.549 -0.422 -- 24.23 9 -- --
103.79 0.478 8.3 -1.49 2.13 -- -0.407 -- -0.459 6.78 -- -- -- --
104.21 0.478 8.3 -1.5 2.12 -- -- -- -0.458 6.78 -- -- -- --
259.12 0.75 8.36 -2.23 -- -0.992 -- -- -0.771 -- -0.003538 776 -- --
149.35 0.569 8.26 -- 2.23 -0.944 -- -- -0.294 7.65 4.912 10 -- --
340.19 0.862 8.35 -1.45 -- -- -- -- -0.417 -- -- -- -- --
163.15 0.597 8.27 -- 2.11 -- -- -- -0.291 6.83 -- -- -- --
234.77 0.714 8.27 -- -- -2.1 -- -- -0.0572 -- -95.94 789 -- --
395.5 0.928 8.31 -- -- -- -- -- -0.256 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 75.19 temperature 10.0 270 > th dose dependent rect. 18 8
2 75.62 temperature 20.0 270 > th dose independent rect. 18 8
17 77.93 temperature 20.0 10 > th dose independent rect. 20 8
26 78.63 temperature 15.0 10 > th dose dependent rect. 20 8
37 79.58 temperature 20.0 270 > th dose independent rect. 7 18
56 80.61 wind 5.0 270 < th dose independent rect. 1 6
71 81.44 temperature 20.0 10 > th dose independent rect. 22 6
78 81.65 precipitation 0.1 270 < th dose independent rect. 1 6
79 81.65 precipitation 0.1 270 < th dose dependent rect. 1 6
87 81.98 radiation 20.0 270 < th dose independent rect. 1 6
88 81.99 temperature 20.0 270 > th dose dependent rect. 22 2
89 82.00 humidity 70.0 270 > th dose independent rect. 1 6
91 82.05 radiation 40.0 270 < th dose dependent rect. 1 6
93 82.07 temperature 10.0 270 > th dose independent rect. 1 6
95 82.07 temperature 30.0 270 < th dose independent rect. 1 6
96 82.07 humidity 50.0 270 > th dose independent rect. 1 6
98 82.07 atmosphere 995.0 270 > th dose independent rect. 1 6
99 82.07 atmosphere 1015.0 270 < th dose independent rect. 1 6
101 82.07 temperature 10.0 270 > th dose independent rect. 7 18
104 82.15 radiation 10.0 270 < th dose dependent rect. 17 9
105 82.17 precipitation 0.1 270 < th dose independent rect. 2 15
106 82.17 precipitation 0.1 270 < th dose dependent rect. 2 15
109 82.20 wind 9.0 270 < th dose independent rect. 7 18
111 82.24 humidity 50.0 270 > th dose independent rect. 17 9
112 82.30 wind 1.0 270 > th dose independent rect. 1 6
119 82.40 radiation 10.0 270 < th dose independent rect. 1 8
125 82.46 radiation 10.0 270 < th dose independent rect. 17 9
129 82.53 radiation 30.0 270 < th dose dependent rect. 1 8
131 82.56 temperature 30.0 270 < th dose independent rect. 17 9
137 82.63 radiation 20.0 90 < th dose independent rect. 3 6
143 82.79 radiation 40.0 90 < th dose dependent rect. 3 8
144 82.80 radiation 1.0 90 < th dose dependent rect. 13 14
147 82.81 humidity 50.0 90 > th dose dependent rect. 18 9
153 82.87 precipitation 0.1 270 < th dose independent rect. 7 18
155 82.87 precipitation 0.1 270 < th dose dependent rect. 7 18
159 82.89 temperature 10.0 270 > th dose independent rect. 17 9
163 82.89 temperature 10.0 270 > th dose independent rect. 2 15
164 82.89 atmosphere 1015.0 270 < th dose independent rect. 2 15
165 82.89 atmosphere 1015.0 270 < th dose independent rect. 7 18
166 82.89 radiation 1.0 270 < th dose dependent rect. 6 20
169 82.91 humidity 70.0 90 > th dose independent rect. 19 8
175 82.92 radiation 1.0 90 < th dose dependent rect. 9 18
180 82.94 radiation 10.0 270 < th dose dependent rect. 1 10
184 82.95 radiation 40.0 90 < th dose dependent rect. 3 6
190 82.97 radiation 1.0 270 < th dose independent rect. 6 20
193 83.00 atmosphere 995.0 270 > th dose independent rect. 17 9
202 83.07 radiation 1.0 270 < th dose independent rect. 13 13
204 83.09 wind 9.0 270 < th dose independent rect. 17 9
210 83.12 radiation 1.0 270 < th dose independent rect. 15 11
223 83.13 precipitation 0.1 270 < th dose independent rect. 13 17
225 83.13 precipitation 0.1 270 < th dose dependent rect. 13 17
236 83.24 wind 5.0 270 < th dose independent rect. 3 2
258 83.29 temperature 10.0 90 > th dose independent rect. 19 8
259 83.29 temperature 30.0 90 < th dose independent rect. 19 8
262 83.29 atmosphere 995.0 90 > th dose independent rect. 19 8
273 83.29 radiation 1.0 90 < th dose dependent rect. 19 8
282 83.32 wind 9.0 270 < th dose independent rect. 6 7
284 83.32 precipitation 0.1 270 < th dose independent rect. 17 9
285 83.32 precipitation 0.1 270 < th dose dependent rect. 17 9
287 83.33 atmosphere 995.0 270 > th dose independent rect. 7 18
294 83.36 wind 9.0 90 < th dose independent rect. 19 8
302 83.39 wind 7.0 270 < th dose independent rect. 13 17
315 83.44 wind 9.0 270 < th dose independent rect. 2 15
319 83.45 precipitation 0.1 270 < th dose independent rect. 6 7
322 83.45 precipitation 0.1 270 < th dose dependent rect. 6 7
323 83.46 temperature 10.0 270 > th dose independent rect. 6 7
324 83.46 atmosphere 995.0 270 > th dose independent rect. 6 7
325 83.46 atmosphere 1015.0 270 < th dose independent rect. 6 7
326 83.46 temperature 10.0 270 > th dose independent rect. 13 17
337 83.50 radiation 40.0 90 < th dose independent rect. 3 16
349 83.52 precipitation 0.1 270 < th dose independent rect. 3 2
351 83.52 precipitation 0.1 270 < th dose dependent rect. 3 2
353 83.53 radiation 1.0 10 < th dose dependent sin 12 NA
375 83.70 temperature 25.0 270 < th dose independent rect. 23 7
381 83.71 precipitation 0.1 90 < th dose independent rect. 19 8
383 83.71 precipitation 0.1 90 < th dose dependent rect. 19 8
392 83.80 wind 9.0 270 < th dose dependent rect. 1 6
396 83.83 temperature 20.0 90 > th dose independent rect. 22 14
411 83.88 temperature 30.0 270 < th dose independent rect. 7 18
430 83.96 temperature 20.0 10 > th dose independent rect. 20 16
438 83.98 temperature 10.0 270 > th dose dependent rect. 2 16
454 84.04 temperature 10.0 270 > th dose independent rect. 3 2
456 84.04 temperature 30.0 270 < th dose independent rect. 3 2
457 84.04 humidity 50.0 270 > th dose independent rect. 3 2
460 84.04 atmosphere 995.0 270 > th dose independent rect. 3 2
461 84.04 atmosphere 1010.0 270 < th dose independent rect. 3 2
463 84.04 radiation 20.0 270 < th dose independent rect. 3 2
469 84.04 humidity 50.0 270 > th dose independent rect. 7 18
472 84.04 temperature 10.0 270 > th dose independent rect. 5 22
473 84.04 radiation 40.0 270 < th dose dependent rect. 3 2
476 84.05 radiation 20.0 270 < th dose dependent rect. 3 2
478 84.06 radiation 1.0 270 < th dose independent rect. 3 2
485 84.08 temperature 20.0 10 > th dose independent rect. 22 14
489 84.10 radiation 20.0 90 < th dose independent rect. 3 8
490 84.10 temperature 20.0 90 > th dose independent rect. 20 16
538 84.36 wind 9.0 270 < th dose independent rect. 5 22
554 84.40 atmosphere 995.0 270 > th dose independent rect. 2 15
568 84.47 radiation 1.0 90 > th dose independent rect. 16 14
583 84.52 wind 9.0 270 < th dose dependent rect. 2 4
589 84.54 radiation 20.0 90 < th dose independent rect. 3 16
598 84.57 atmosphere 1015.0 90 < th dose independent rect. 19 8
614 84.64 temperature 30.0 270 < th dose dependent rect. 1 5
627 84.65 wind 9.0 90 < th dose independent rect. 9 18
633 84.66 temperature 20.0 10 > th dose independent rect. 7 21
634 84.66 radiation 40.0 90 < th dose dependent rect. 3 16
640 84.68 wind 9.0 270 < th dose dependent rect. 7 18
647 84.71 temperature 30.0 90 < th dose dependent rect. 3 4
673 84.76 wind 9.0 90 < th dose dependent rect. 3 6
677 84.78 radiation 40.0 10 < th dose dependent rect. 3 8
689 84.79 temperature 20.0 10 > th dose independent rect. 9 19
694 84.81 radiation 1.0 10 > th dose dependent rect. 7 5
698 84.83 wind 5.0 270 < th dose independent rect. 7 18
712 84.86 radiation 20.0 10 < th dose independent rect. 3 7
727 84.92 wind 9.0 90 < th dose dependent rect. 7 20
742 84.96 temperature 10.0 90 > th dose independent rect. 9 18
745 84.97 radiation 40.0 270 < th dose independent rect. 14 16
758 85.01 wind 9.0 90 < th dose dependent rect. 9 18
778 85.06 temperature 20.0 10 > th dose independent rect. 20 18
807 85.18 precipitation 0.1 90 < th dose independent rect. 16 15
809 85.18 precipitation 0.1 90 < th dose dependent rect. 16 15
817 85.20 humidity 50.0 270 > th dose dependent rect. 1 6
818 85.21 wind 9.0 270 < th dose dependent rect. 3 2
845 85.27 temperature 10.0 270 > th dose dependent rect. 12 7
846 85.28 humidity 50.0 270 > th dose independent rect. 6 7
847 85.29 atmosphere 995.0 270 > th dose independent rect. 13 17
854 85.31 wind 1.0 270 > th dose independent rect. 1 17
858 85.33 radiation 1.0 30 < th dose independent sin 12 NA
882 85.36 radiation 40.0 10 < th dose dependent rect. 4 16
902 85.40 wind 1.0 270 > th dose independent rect. 13 17
909 85.43 radiation 1.0 30 > th dose independent sin 12 NA
915 85.43 humidity 50.0 270 > th dose dependent rect. 2 4
928 85.47 radiation 20.0 10 < th dose independent rect. 16 17
931 85.48 radiation 1.0 270 > th dose independent rect. 6 7
936 85.48 wind 9.0 90 < th dose dependent rect. 19 8
949 85.52 radiation 20.0 14400 < th dose dependent rect. 20 8
952 85.53 wind 1.0 270 > th dose independent rect. 7 18
967 85.56 atmosphere 995.0 90 > th dose dependent rect. 19 8
981 85.60 temperature 20.0 10 > th dose independent rect. 22 16
993 85.62 humidity 50.0 90 > th dose dependent rect. 3 6