Os02g0220800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0220800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 142.14 | 0.56 | 6.55 | 0.247 | 0.401 | -1.47 | 0.257 | -0.25 | -0.187 | 3.58 | 21.9 | 831 | -- | -- |
| 142.23 | 0.555 | 6.54 | 0.293 | 0.403 | -1.44 | 0.255 | -- | -0.168 | 3.68 | 21.97 | 837 | -- | -- |
| 142.26 | 0.556 | 6.55 | 0.235 | 0.403 | -1.45 | -- | -0.187 | -0.18 | 3.37 | 21.94 | 837 | -- | -- |
| 142.37 | 0.556 | 6.54 | 0.293 | 0.403 | -1.45 | -- | -- | -0.167 | 3.37 | 21.97 | 837 | -- | -- |
| 149.76 | 0.57 | 6.55 | 0.226 | -- | -1.39 | -- | -0.159 | -0.187 | -- | 21.96 | 695 | -- | -- |
| 223.6 | 0.701 | 6.64 | -0.218 | 0.423 | -- | 1.01 | -- | -0.619 | 6.42 | -- | -- | -- | -- |
| 226.03 | 0.704 | 6.64 | -0.206 | 0.431 | -- | -- | -- | -0.623 | 6.01 | -- | -- | -- | -- |
| 149.85 | 0.57 | 6.55 | 0.275 | -- | -1.39 | -- | -- | -0.175 | -- | 21.98 | 695 | -- | -- |
| 144.3 | 0.559 | 6.55 | -- | 0.412 | -1.35 | -- | -- | -0.205 | 3.55 | 22.18 | 844 | -- | -- |
| 235.65 | 0.717 | 6.65 | -0.193 | -- | -- | -- | -- | -0.614 | -- | -- | -- | -- | -- |
| 227.15 | 0.705 | 6.63 | -- | 0.428 | -- | -- | -- | -0.601 | 6.04 | -- | -- | -- | -- |
| 151.54 | 0.573 | 6.56 | -- | -- | -1.32 | -- | -- | -0.214 | -- | 22.07 | 694 | -- | -- |
| 236.64 | 0.718 | 6.64 | -- | -- | -- | -- | -- | -0.592 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 140.28 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 3 | 140.91 | temperature | 15 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 7 | 142.20 | temperature | 10 | 720 | > th | dose dependent | sin | 10 | NA |
| 11 | 142.58 | temperature | 25 | 270 | < th | dose dependent | rect. | 24 | 22 |
| 23 | 143.66 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 25 | 143.70 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 18 |
| 32 | 144.24 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 55 | 144.85 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 63 | 145.11 | temperature | 30 | 720 | < th | dose dependent | sin | 10 | NA |
| 70 | 145.32 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 126 | 146.48 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 132 | 146.64 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 135 | 146.72 | temperature | 25 | 720 | < th | dose dependent | rect. | 10 | 23 |
| 163 | 147.07 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 198 | 147.73 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 209 | 147.85 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 229 | 148.07 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 233 | 148.10 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 272 | 148.62 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 322 | 149.10 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 433 | 150.19 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 13 |
| 472 | 150.59 | temperature | 15 | 1440 | > th | dose dependent | rect. | 18 | 11 |
| 479 | 150.63 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 568 | 151.05 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 593 | 151.18 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 9 |
| 617 | 151.25 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 645 | 151.33 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 688 | 151.50 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 691 | 151.51 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 759 | 151.74 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 784 | 151.83 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 802 | 151.90 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 813 | 151.95 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 3 |
| 821 | 151.98 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 921 | 152.23 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |