Os02g0220700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase domain containing protein.
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Os02g0220700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 112.95 | 0.499 | 2.9 | -0.312 | 0.186 | 2.83 | 0.315 | -7.07 | -0.00867 | 11.2 | 0.2902 | 525 | -- | -- |
| 119.01 | 0.508 | 2.87 | -0.171 | 0.221 | 1.65 | 0.254 | -- | -0.0571 | 8.29 | 1.245 | 135 | -- | -- |
| 113.36 | 0.496 | 2.9 | -0.291 | 0.184 | 2.71 | -- | -6.84 | -0.00978 | 11.3 | 0.2895 | 524 | -- | -- |
| 117.19 | 0.504 | 2.86 | -0.153 | 0.199 | 1.58 | -- | -- | -0.0518 | 10.9 | 1.526 | 53 | -- | -- |
| 115.43 | 0.5 | 2.91 | -0.295 | -- | 2.81 | -- | -7.41 | -0.0108 | -- | 0.2851 | 524 | -- | -- |
| 121 | 0.516 | 2.87 | -0.133 | 0.188 | -- | 0.0351 | -- | -0.0562 | 11.3 | -- | -- | -- | -- |
| 121.01 | 0.515 | 2.87 | -0.132 | 0.188 | -- | -- | -- | -0.0561 | 11.3 | -- | -- | -- | -- |
| 119.64 | 0.509 | 2.87 | -0.154 | -- | 1.62 | -- | -- | -0.0534 | -- | 1.533 | 55 | -- | -- |
| 117.83 | 0.506 | 2.86 | -- | 0.199 | 1.65 | -- | -- | -0.0345 | 10.9 | 1.542 | 55 | -- | -- |
| 123.21 | 0.519 | 2.87 | -0.137 | -- | -- | -- | -- | -0.058 | -- | -- | -- | -- | -- |
| 121.47 | 0.516 | 2.86 | -- | 0.189 | -- | -- | -- | -0.0414 | 11.4 | -- | -- | -- | -- |
| 120.29 | 0.511 | 2.87 | -- | -- | 1.59 | -- | -- | -0.0356 | -- | 1.706 | 55 | -- | -- |
| 123.71 | 0.519 | 2.87 | -- | -- | -- | -- | -- | -0.0428 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 108.95 | humidity | 80.0 | 90 | > th | dose independent | rect. | 11 | 2 |
| 3 | 109.27 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 8 | 1 |
| 4 | 109.27 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 8 | 1 |
| 9 | 111.03 | wind | 1.0 | 90 | < th | dose independent | rect. | 10 | 1 |
| 11 | 111.09 | wind | 1.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 15 | 111.13 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 5 | 6 |
| 17 | 111.14 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 8 | 5 |
| 18 | 111.15 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 8 | 1 |
| 20 | 111.15 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 5 | 6 |
| 34 | 111.50 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 8 | 10 |
| 40 | 111.70 | radiation | 30.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 55 | 111.97 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 58 | 112.03 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 11 | 1 |
| 80 | 112.45 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 2 | 9 |
| 91 | 112.51 | radiation | 1.0 | 720 | < th | dose independent | rect. | 24 | 13 |
| 104 | 112.59 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 108 | 112.64 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 2 | 9 |
| 132 | 112.77 | radiation | 20.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 138 | 112.79 | precipitation | 0.1 | 720 | > th | dose dependent | sin | 5 | NA |
| 143 | 112.81 | precipitation | 0.1 | 720 | > th | dose independent | sin | 5 | NA |
| 148 | 112.82 | precipitation | 0.1 | 720 | < th | dose independent | sin | 5 | NA |
| 149 | 112.82 | precipitation | 0.1 | 720 | < th | dose dependent | sin | 5 | NA |
| 153 | 112.83 | radiation | 1.0 | 270 | < th | dose independent | rect. | 7 | 5 |
| 202 | 112.99 | wind | 1.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 282 | 113.19 | wind | 5.0 | 90 | > th | dose dependent | rect. | 8 | 3 |
| 291 | 113.21 | wind | 7.0 | 90 | > th | dose independent | rect. | 8 | 3 |
| 317 | 113.29 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 341 | 113.36 | wind | 9.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 352 | 113.38 | humidity | 90.0 | 270 | > th | dose independent | rect. | 7 | 11 |
| 392 | 113.52 | radiation | 1.0 | 720 | > th | dose independent | rect. | 5 | 9 |
| 404 | 113.54 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 406 | 113.55 | wind | 7.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 445 | 113.60 | wind | 5.0 | 10 | > th | dose dependent | rect. | 9 | 5 |
| 486 | 113.69 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 8 | 4 |
| 517 | 113.75 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 9 | 2 |
| 519 | 113.76 | wind | 7.0 | 10 | > th | dose independent | sin | 6 | NA |
| 533 | 113.78 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 7 | 5 |
| 563 | 113.86 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 24 | 13 |
| 613 | 113.97 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 17 | 18 |
| 630 | 114.01 | wind | 1.0 | 90 | > th | dose dependent | rect. | 4 | 11 |
| 655 | 114.06 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 675 | 114.09 | wind | 5.0 | 10 | > th | dose dependent | sin | 5 | NA |
| 723 | 114.21 | radiation | 1.0 | 720 | > th | dose independent | sin | 5 | NA |
| 730 | 114.22 | wind | 7.0 | 270 | > th | dose independent | rect. | 8 | 1 |
| 744 | 114.24 | radiation | 1.0 | 720 | < th | dose independent | sin | 5 | NA |
| 751 | 114.25 | humidity | 80.0 | 90 | > th | dose independent | rect. | 10 | 13 |
| 770 | 114.28 | wind | 1.0 | 90 | > th | dose dependent | sin | 3 | NA |
| 791 | 114.32 | wind | 9.0 | 90 | < th | dose dependent | sin | 2 | NA |
| 872 | 114.44 | radiation | 1.0 | 90 | < th | dose independent | rect. | 10 | 1 |
| 878 | 114.44 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 883 | 114.45 | wind | 3.0 | 90 | < th | dose independent | rect. | 10 | 5 |
| 901 | 114.47 | wind | 3.0 | 10 | > th | dose dependent | rect. | 9 | 3 |
| 911 | 114.48 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 5 | 15 |
| 937 | 114.51 | radiation | 1.0 | 720 | > th | dose independent | rect. | 18 | 15 |
| 938 | 114.51 | humidity | 80.0 | 90 | > th | dose independent | rect. | 10 | 19 |
| 962 | 114.55 | wind | 5.0 | 10 | > th | dose independent | rect. | 9 | 3 |
| 976 | 114.56 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 11 |