Os02g0218500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0218500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.51 | 0.371 | 8.52 | 0.189 | 0.396 | -0.961 | -0.633 | -1.4 | -0.31 | 11.7 | 26.2 | 134 | -- | -- |
| 64.82 | 0.375 | 8.54 | -0.0492 | 0.398 | -0.896 | -0.316 | -- | -0.373 | 11.2 | 27.55 | 136 | -- | -- |
| 63.74 | 0.372 | 8.53 | 0.0979 | 0.413 | -0.947 | -- | -1.02 | -0.333 | 11 | 26.86 | 166 | -- | -- |
| 65.16 | 0.376 | 8.55 | -0.0727 | 0.4 | -0.906 | -- | -- | -0.369 | 10.9 | 27.6 | 136 | -- | -- |
| 69.95 | 0.392 | 8.55 | 0.0122 | -- | -1.11 | -- | -0.741 | -0.363 | -- | 29.29 | 13 | -- | -- |
| 76.26 | 0.409 | 8.5 | 0.167 | 0.558 | -- | -0.305 | -- | -0.173 | 12.6 | -- | -- | -- | -- |
| 76.65 | 0.41 | 8.5 | 0.156 | 0.559 | -- | -- | -- | -0.174 | 12.5 | -- | -- | -- | -- |
| 70.77 | 0.394 | 8.56 | -0.113 | -- | -1.11 | -- | -- | -0.397 | -- | 29.29 | 13 | -- | -- |
| 65.3 | 0.376 | 8.54 | -- | 0.403 | -0.881 | -- | -- | -0.357 | 11 | 27.58 | 136 | -- | -- |
| 96.26 | 0.458 | 8.51 | 0.136 | -- | -- | -- | -- | -0.184 | -- | -- | -- | -- | -- |
| 77.29 | 0.411 | 8.51 | -- | 0.557 | -- | -- | -- | -0.192 | 12.5 | -- | -- | -- | -- |
| 70.99 | 0.392 | 8.56 | -- | -- | -1.08 | -- | -- | -0.379 | -- | 29.5 | 5 | -- | -- |
| 96.75 | 0.459 | 8.52 | -- | -- | -- | -- | -- | -0.199 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 61.47 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 22 |
| 7 | 62.28 | temperature | 30 | 90 | < th | dose dependent | rect. | 10 | 21 |
| 9 | 62.38 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 21 |
| 13 | 62.60 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 22 |
| 29 | 62.90 | humidity | 80 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 31 | 62.91 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 19 |
| 33 | 62.93 | humidity | 50 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 47 | 63.03 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 52 | 63.07 | humidity | 50 | 43200 | > th | dose dependent | rect. | 1 | 4 |
| 65 | 63.15 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 22 |
| 77 | 63.21 | humidity | 50 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 95 | 63.26 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 105 | 63.32 | humidity | 90 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 129 | 63.41 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 152 | 63.51 | wind | 3 | 14400 | < th | dose dependent | rect. | 18 | 8 |
| 153 | 63.51 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 157 | 63.52 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 160 | 63.53 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 164 | 63.56 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 180 | 63.63 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 214 | 63.71 | wind | 3 | 14400 | < th | dose dependent | sin | 14 | NA |
| 217 | 63.72 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 227 | 63.74 | wind | 3 | 14400 | < th | dose dependent | rect. | 11 | 19 |
| 244 | 63.79 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 247 | 63.81 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 7 |
| 271 | 63.85 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 272 | 63.85 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 273 | 63.85 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 278 | 63.86 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 295 | 63.87 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 296 | 63.88 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 297 | 63.88 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 5 |
| 313 | 63.90 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 12 | 12 |
| 326 | 63.92 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 15 | 4 |
| 335 | 63.93 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 348 | 63.93 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 349 | 63.94 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 350 | 63.94 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 366 | 63.95 | atmosphere | 1010 | 43200 | > th | dose dependent | sin | 16 | NA |
| 408 | 63.96 | temperature | 15 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 409 | 63.97 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 460 | 63.99 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 10 | 9 |
| 495 | 64.00 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 18 |
| 522 | 64.02 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 15 | 4 |
| 525 | 64.02 | wind | 3 | 43200 | < th | dose dependent | rect. | 22 | 4 |
| 626 | 64.06 | atmosphere | 1010 | 43200 | > th | dose dependent | no | NA | NA |
| 638 | 64.06 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 17 | 20 |
| 656 | 64.06 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 20 | 23 |
| 661 | 64.07 | wind | 3 | 43200 | < th | dose dependent | rect. | 23 | 2 |
| 669 | 64.07 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 18 | 18 |
| 734 | 64.08 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 849 | 64.13 | temperature | 15 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 896 | 64.16 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 15 | 9 |
| 988 | 64.20 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 3 | 1 |