Os02g0218400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UspA domain containing protein.
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Os02g0218400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UspA domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 94.24 | 0.456 | 6.22 | 0.298 | 0.696 | -0.482 | -0.0676 | 0.96 | 0.475 | 14.2 | 19.58 | 2029 | -- | -- |
| 95.15 | 0.454 | 6.25 | 0.177 | 0.695 | -0.742 | -0.14 | -- | 0.447 | 14.3 | 19 | 2023 | -- | -- |
| 93.95 | 0.451 | 6.22 | 0.305 | 0.705 | -0.504 | -- | 1.02 | 0.477 | 14.2 | 19.2 | 2036 | -- | -- |
| 95.21 | 0.454 | 6.25 | 0.176 | 0.692 | -0.742 | -- | -- | 0.447 | 14.3 | 19 | 2027 | -- | -- |
| 120.89 | 0.512 | 6.23 | 0.325 | -- | -0.6 | -- | 0.904 | 0.47 | -- | 19.2 | 2442 | -- | -- |
| 103.89 | 0.478 | 6.28 | -0.141 | 0.71 | -- | -0.1 | -- | 0.309 | 14.2 | -- | -- | -- | -- |
| 103.93 | 0.477 | 6.28 | -0.144 | 0.709 | -- | -- | -- | 0.308 | 14.1 | -- | -- | -- | -- |
| 121.58 | 0.514 | 6.25 | 0.251 | -- | -0.889 | -- | -- | 0.464 | -- | 18.5 | 2378 | -- | -- |
| 95.71 | 0.456 | 6.26 | -- | 0.689 | -0.701 | -- | -- | 0.407 | 14.2 | 18.6 | 2025 | -- | -- |
| 134.01 | 0.541 | 6.29 | -0.174 | -- | -- | -- | -- | 0.292 | -- | -- | -- | -- | -- |
| 104.47 | 0.478 | 6.28 | -- | 0.712 | -- | -- | -- | 0.324 | 14.1 | -- | -- | -- | -- |
| 122.76 | 0.516 | 6.26 | -- | -- | -0.74 | -- | -- | 0.411 | -- | 18.7 | 2370 | -- | -- |
| 134.8 | 0.542 | 6.28 | -- | -- | -- | -- | -- | 0.311 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 86.02 | temperature | 20.0 | 270 | > th | dose independent | rect. | 24 | 8 |
| 6 | 87.00 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 24 | 8 |
| 7 | 87.06 | radiation | 30.0 | 270 | < th | dose independent | rect. | 12 | 19 |
| 10 | 87.26 | temperature | 20.0 | 10 | > th | dose independent | rect. | 12 | 23 |
| 13 | 87.36 | temperature | 20.0 | 30 | > th | dose independent | rect. | 12 | 21 |
| 24 | 87.73 | humidity | 80.0 | 270 | > th | dose independent | rect. | 24 | 8 |
| 25 | 87.74 | radiation | 40.0 | 90 | < th | dose independent | rect. | 12 | 21 |
| 29 | 87.87 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 13 | 20 |
| 39 | 88.09 | radiation | 30.0 | 270 | < th | dose independent | rect. | 24 | 8 |
| 42 | 88.19 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 12 | 19 |
| 47 | 88.24 | wind | 9.0 | 90 | < th | dose independent | rect. | 9 | 16 |
| 49 | 88.27 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 5 |
| 50 | 88.31 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 51 | 88.31 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 52 | 88.31 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 5 |
| 53 | 88.31 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 19 |
| 54 | 88.31 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 8 |
| 57 | 88.34 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 5 |
| 60 | 88.34 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 5 |
| 61 | 88.36 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 66 | 88.46 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 16 |
| 67 | 88.47 | wind | 9.0 | 90 | < th | dose independent | rect. | 1 | 8 |
| 68 | 88.47 | temperature | 10.0 | 90 | > th | dose independent | rect. | 1 | 8 |
| 71 | 88.47 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 1 | 8 |
| 72 | 88.47 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 1 | 8 |
| 73 | 88.47 | temperature | 10.0 | 90 | > th | dose independent | rect. | 9 | 16 |
| 75 | 88.48 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 12 | 21 |
| 83 | 88.58 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 8 |
| 92 | 88.60 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 9 | 16 |
| 93 | 88.60 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 9 | 16 |
| 116 | 88.76 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 118 | 88.82 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 19 |
| 122 | 88.86 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 1 | 8 |
| 123 | 88.86 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 1 | 8 |
| 126 | 88.88 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 24 | 8 |
| 134 | 88.92 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 20 | 16 |
| 135 | 88.92 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 20 | 16 |
| 141 | 89.00 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 145 | 89.02 | wind | 1.0 | 90 | > th | dose independent | rect. | 9 | 17 |
| 147 | 89.04 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 8 |
| 155 | 89.05 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 170 | 89.13 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 19 |
| 171 | 89.13 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 19 |
| 203 | 89.26 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 9 | 16 |
| 207 | 89.29 | wind | 9.0 | 270 | < th | dose independent | rect. | 20 | 16 |
| 245 | 89.38 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 3 |
| 255 | 89.40 | temperature | 15.0 | 270 | > th | dose independent | rect. | 12 | 8 |
| 259 | 89.41 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 12 | 8 |
| 260 | 89.41 | temperature | 10.0 | 270 | > th | dose independent | rect. | 20 | 16 |
| 261 | 89.41 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 20 | 16 |
| 264 | 89.42 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 9 | 17 |
| 265 | 89.43 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 8 |
| 275 | 89.45 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 284 | 89.49 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 12 | 8 |
| 292 | 89.52 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 12 | 19 |
| 299 | 89.55 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 13 | 20 |
| 315 | 89.60 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 3 |
| 334 | 89.66 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 356 | 89.73 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 19 |
| 372 | 89.78 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 8 |
| 374 | 89.78 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 8 |
| 380 | 89.82 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 8 |
| 384 | 89.83 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 5 |
| 414 | 89.93 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 19 |
| 421 | 89.96 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 1 | 8 |
| 428 | 90.00 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 17 |
| 438 | 90.04 | radiation | 30.0 | 10 | < th | dose independent | rect. | 2 | 8 |
| 460 | 90.12 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 2 | 9 |
| 465 | 90.14 | radiation | 30.0 | 10 | < th | dose independent | rect. | 13 | 20 |
| 522 | 90.35 | humidity | 50.0 | 270 | > th | dose independent | rect. | 20 | 16 |
| 562 | 90.48 | radiation | 40.0 | 90 | < th | dose independent | rect. | 12 | 9 |
| 608 | 90.55 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 15 |
| 614 | 90.56 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 7 | 18 |
| 620 | 90.58 | humidity | 60.0 | 10 | > th | dose independent | rect. | 2 | 8 |
| 634 | 90.59 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 680 | 90.73 | wind | 9.0 | 10 | < th | dose independent | rect. | 10 | 16 |
| 705 | 90.80 | temperature | 20.0 | 10 | > th | dose independent | rect. | 13 | 10 |
| 776 | 90.90 | wind | 9.0 | 10 | < th | dose independent | rect. | 2 | 7 |
| 777 | 90.90 | temperature | 10.0 | 10 | > th | dose independent | rect. | 2 | 7 |
| 779 | 90.90 | temperature | 30.0 | 10 | < th | dose independent | rect. | 2 | 7 |
| 782 | 90.90 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 2 | 7 |
| 783 | 90.90 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 2 | 7 |
| 784 | 90.90 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 17 |
| 786 | 90.90 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 2 | 7 |
| 825 | 90.98 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 1 | 18 |
| 837 | 91.02 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 17 |
| 839 | 91.02 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 17 |
| 841 | 91.03 | humidity | 70.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 854 | 91.05 | wind | 1.0 | 10 | > th | dose independent | rect. | 10 | 16 |
| 855 | 91.05 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 9 | 16 |
| 882 | 91.08 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 884 | 91.09 | wind | 1.0 | 270 | > th | dose independent | rect. | 24 | 7 |
| 888 | 91.09 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 13 | 10 |
| 911 | 91.12 | radiation | 10.0 | 270 | < th | dose dependent | sin | 4 | NA |
| 914 | 91.12 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 9 | 20 |
| 916 | 91.13 | temperature | 30.0 | 270 | < th | dose independent | rect. | 20 | 16 |
| 941 | 91.17 | wind | 9.0 | 90 | < th | dose dependent | rect. | 1 | 8 |
| 944 | 91.18 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 7 |
| 947 | 91.18 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 7 |
| 950 | 91.18 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 17 |
| 964 | 91.20 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 1 |
| 998 | 91.24 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 14 |