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Os02g0218300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Non-protein coding transcript, uncharacterized transcript.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.0235) R2 : 0.00771
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0931 (0.0495) R2dN8 : 0.00996 R2N8 : 0.00771
σ : 0.442
deviance : 89.81
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
66.05 0.382 11.2 -0.289 0.492 0.43 -0.402 0.321 -0.113 15.9 0.1976 12 -- --
66.48 0.38 11.2 -0.295 0.495 0.441 -0.643 -- -0.113 15.7 0.2496 11 -- --
66.36 0.379 11.2 -0.301 0.501 0.437 -- 0.46 -0.106 15.9 0.17 16 -- --
67.67 0.383 11.2 -0.29 0.492 0.447 -- -- -0.109 15.8 0.1769 11 -- --
76.57 0.41 11.2 -0.332 -- 0.284 -- 0.447 -0.122 -- 0.17 16 -- --
72.24 0.398 11.2 -0.325 0.518 -- 0.0948 -- -0.123 19.9 -- -- -- --
72.27 0.398 11.2 -0.327 0.519 -- -- -- -0.123 19.9 -- -- -- --
77.87 0.413 11.2 -0.318 -- 0.287 -- -- -0.117 -- 0.1769 11 -- --
69.79 0.389 11.2 -- 0.507 0.481 -- -- -0.0781 15.5 0.17 11 -- --
86.88 0.436 11.2 -0.333 -- -- -- -- -0.13 -- -- -- -- --
75.09 0.405 11.2 -- 0.521 -- -- -- -0.0866 19.8 -- -- -- --
80.23 0.419 11.2 -- -- 0.293 -- -- -0.0806 -- 0.17 4 -- --
89.81 0.442 11.2 -- -- -- -- -- -0.0931 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 55.81 atmosphere 1015.0 90 < th dose independent rect. 9 19
2 55.90 atmosphere 995.0 90 > th dose independent rect. 9 19
3 56.30 humidity 60.0 90 > th dose independent rect. 4 5
4 56.34 wind 9.0 90 < th dose independent rect. 4 5
5 56.34 temperature 10.0 90 > th dose independent rect. 4 5
8 56.34 atmosphere 995.0 90 > th dose independent rect. 4 5
9 56.34 atmosphere 1015.0 90 < th dose independent rect. 4 5
10 56.34 wind 9.0 90 < th dose independent rect. 9 19
11 56.34 temperature 10.0 90 > th dose independent rect. 9 19
12 56.37 radiation 40.0 90 < th dose independent rect. 4 5
13 56.37 precipitation 0.1 90 < th dose independent rect. 4 5
14 56.37 precipitation 0.1 90 < th dose dependent rect. 4 5
15 56.40 atmosphere 1015.0 270 < th dose independent rect. 7 20
17 56.50 temperature 30.0 90 < th dose independent rect. 4 5
18 56.62 precipitation 0.1 90 < th dose independent rect. 9 19
19 56.62 precipitation 0.1 90 < th dose dependent rect. 9 19
20 56.73 humidity 50.0 270 > th dose dependent rect. 3 4
21 56.75 radiation 20.0 270 < th dose independent rect. 3 4
23 56.81 wind 9.0 270 < th dose independent rect. 4 2
24 56.81 temperature 10.0 270 > th dose independent rect. 4 2
26 56.81 temperature 30.0 270 < th dose independent rect. 4 2
27 56.81 humidity 50.0 270 > th dose independent rect. 4 2
30 56.81 atmosphere 995.0 270 > th dose independent rect. 4 2
31 56.81 atmosphere 1015.0 270 < th dose independent rect. 4 2
32 56.81 radiation 20.0 270 < th dose independent rect. 4 2
45 56.81 temperature 10.0 270 > th dose independent rect. 7 20
46 56.81 temperature 10.0 270 > th dose independent rect. 6 22
48 56.82 precipitation 0.1 270 < th dose independent rect. 7 20
49 56.82 humidity 50.0 270 > th dose dependent rect. 4 2
50 56.82 precipitation 0.1 270 < th dose dependent rect. 7 20
53 56.86 wind 9.0 270 < th dose independent rect. 7 20
54 56.86 radiation 40.0 270 < th dose dependent rect. 4 2
56 56.87 precipitation 0.1 270 < th dose independent rect. 4 2
57 56.87 precipitation 0.1 270 < th dose dependent rect. 4 2
62 56.91 radiation 40.0 270 < th dose dependent rect. 3 4
64 56.92 atmosphere 995.0 270 > th dose independent rect. 7 20
65 56.95 precipitation 0.1 270 < th dose independent rect. 6 22
66 56.95 precipitation 0.1 270 < th dose dependent rect. 6 22
72 57.06 temperature 10.0 90 > th dose dependent rect. 9 19
81 57.26 atmosphere 1015.0 10 < th dose independent rect. 9 20
82 57.28 wind 9.0 270 < th dose independent rect. 6 22
105 57.33 atmosphere 995.0 10 > th dose independent rect. 9 20
113 57.42 temperature 10.0 90 > th dose dependent rect. 4 5
122 57.49 atmosphere 995.0 270 > th dose independent rect. 6 22
124 57.51 temperature 10.0 270 > th dose dependent rect. 4 2
126 57.54 wind 9.0 90 < th dose dependent rect. 4 5
142 57.61 temperature 10.0 10 > th dose dependent rect. 9 20
153 57.76 humidity 50.0 10 > th dose dependent rect. 5 6
155 57.79 wind 7.0 10 < th dose independent rect. 5 4
157 57.79 temperature 10.0 10 > th dose independent rect. 5 4
159 57.79 temperature 30.0 10 < th dose independent rect. 5 4
160 57.79 humidity 50.0 10 > th dose independent rect. 5 4
162 57.79 atmosphere 995.0 10 > th dose independent rect. 5 4
163 57.79 atmosphere 1015.0 10 < th dose independent rect. 5 4
164 57.79 temperature 10.0 10 > th dose independent rect. 9 20
182 57.84 precipitation 0.1 10 < th dose independent rect. 5 4
184 57.84 precipitation 0.1 10 < th dose dependent rect. 5 4
186 57.84 temperature 10.0 270 > th dose dependent rect. 18 9
187 57.86 atmosphere 1015.0 270 < th dose independent rect. 22 14
190 57.88 radiation 40.0 10 < th dose independent rect. 5 4
212 57.94 wind 9.0 270 < th dose dependent rect. 4 2
223 58.01 precipitation 0.1 10 < th dose independent rect. 9 20
224 58.01 precipitation 0.1 10 < th dose dependent rect. 9 20
233 58.06 wind 9.0 10 < th dose independent rect. 9 20
252 58.16 humidity 50.0 90 > th dose independent rect. 9 19
253 58.16 radiation 40.0 10 < th dose dependent rect. 5 6
285 58.30 atmosphere 995.0 90 > th dose dependent rect. 4 5
323 58.43 wind 1.0 90 > th dose independent rect. 9 19
328 58.46 temperature 10.0 10 > th dose dependent rect. 5 4
334 58.49 atmosphere 995.0 270 > th dose dependent rect. 4 2
349 58.55 radiation 1.0 270 > th dose independent rect. 8 4
353 58.56 precipitation 0.1 270 < th dose independent rect. 22 14
355 58.56 precipitation 0.1 270 < th dose dependent rect. 22 14
371 58.60 wind 9.0 270 < th dose independent rect. 8 4
373 58.60 radiation 10.0 270 < th dose independent rect. 17 10
377 58.62 humidity 50.0 270 > th dose independent rect. 7 20
378 58.63 precipitation 0.1 270 < th dose independent rect. 8 4
381 58.63 temperature 10.0 270 > th dose independent rect. 12 10
382 58.63 temperature 10.0 270 > th dose independent rect. 22 14
383 58.63 atmosphere 995.0 270 > th dose independent rect. 22 14
384 58.63 precipitation 0.1 270 < th dose dependent rect. 8 4
386 58.64 wind 9.0 270 < th dose independent rect. 22 14
392 58.65 temperature 10.0 10 > th dose dependent rect. 20 9
398 58.67 temperature 10.0 270 > th dose independent rect. 8 4
399 58.67 atmosphere 995.0 270 > th dose independent rect. 8 4
400 58.67 atmosphere 1015.0 270 < th dose independent rect. 8 4
401 58.67 temperature 10.0 270 > th dose independent rect. 12 20
405 58.68 wind 9.0 10 < th dose dependent rect. 5 4
410 58.69 atmosphere 1015.0 270 < th dose dependent rect. 3 4
414 58.71 wind 9.0 270 < th dose independent rect. 12 20
459 58.80 precipitation 0.1 270 < th dose independent rect. 12 10
462 58.80 precipitation 0.1 270 < th dose dependent rect. 12 10
480 58.85 precipitation 0.1 270 < th dose independent rect. 12 20
483 58.85 precipitation 0.1 270 < th dose dependent rect. 12 20
484 58.86 wind 9.0 270 < th dose independent rect. 17 10
485 58.87 wind 1.0 270 > th dose independent rect. 12 10
488 58.88 humidity 50.0 270 > th dose independent rect. 8 4
502 58.93 temperature 30.0 270 < th dose independent rect. 8 4
505 58.94 wind 9.0 270 < th dose independent rect. 12 10
520 59.00 temperature 10.0 270 > th dose independent rect. 17 10
524 59.00 temperature 10.0 270 > th dose independent rect. 3 14
525 59.00 humidity 50.0 270 > th dose independent rect. 22 14
526 59.00 atmosphere 1015.0 270 < th dose independent rect. 3 14
528 59.01 humidity 50.0 270 > th dose independent rect. 12 20
532 59.02 radiation 1.0 270 > th dose independent rect. 7 6
562 59.09 precipitation 0.1 270 < th dose independent rect. 17 10
564 59.09 precipitation 0.1 270 < th dose dependent rect. 17 10
565 59.10 wind 1.0 270 > th dose independent rect. 3 4
568 59.11 wind 1.0 270 > th dose independent rect. 8 4
573 59.12 precipitation 0.1 270 < th dose independent rect. 7 6
574 59.12 precipitation 0.1 270 < th dose independent rect. 3 14
575 59.12 humidity 50.0 270 > th dose independent rect. 14 17
579 59.12 precipitation 0.1 270 < th dose dependent rect. 7 6
580 59.12 precipitation 0.1 270 < th dose dependent rect. 3 14
581 59.13 humidity 90.0 270 < th dose independent rect. 8 4
588 59.17 temperature 10.0 270 > th dose independent rect. 7 6
589 59.17 atmosphere 995.0 270 > th dose independent rect. 7 6
590 59.17 atmosphere 1015.0 270 < th dose independent rect. 7 6
591 59.17 temperature 10.0 270 > th dose independent rect. 13 18
593 59.18 wind 9.0 270 < th dose independent rect. 7 6
595 59.19 temperature 25.0 270 < th dose independent rect. 15 16
598 59.19 radiation 40.0 270 < th dose dependent rect. 17 10
600 59.21 wind 9.0 270 < th dose independent rect. 13 18
601 59.21 temperature 30.0 270 < th dose dependent rect. 3 4
602 59.21 atmosphere 995.0 10 > th dose dependent rect. 5 4
607 59.22 atmosphere 1015.0 270 < th dose dependent rect. 4 2
625 59.26 radiation 1.0 270 < th dose independent rect. 3 12
628 59.27 humidity 50.0 4320 > th dose independent rect. 5 5
639 59.31 temperature 10.0 1440 > th dose independent rect. 5 5
642 59.31 atmosphere 995.0 1440 > th dose independent rect. 5 5
643 59.31 atmosphere 1015.0 1440 < th dose independent rect. 5 5
646 59.31 temperature 10.0 1440 > th dose independent rect. 10 19
652 59.32 wind 9.0 270 < th dose independent rect. 3 14
653 59.32 precipitation 0.1 270 < th dose independent rect. 13 18
656 59.32 precipitation 0.1 270 < th dose dependent rect. 13 18
672 59.34 atmosphere 995.0 270 > th dose independent rect. 12 20
699 59.38 humidity 50.0 270 > th dose independent rect. 7 6
712 59.42 atmosphere 995.0 270 > th dose independent rect. 17 10
785 59.55 humidity 50.0 270 > th dose independent rect. 3 14
801 59.60 radiation 40.0 90 < th dose independent rect. 14 19
844 59.67 radiation 10.0 270 < th dose dependent rect. 3 10
845 59.68 wind 1.0 270 > th dose independent rect. 7 6
872 59.72 wind 1.0 270 > th dose independent rect. 5 1
874 59.72 wind 1.0 270 > th dose independent rect. 12 20
879 59.73 wind 1.0 10 > th dose independent rect. 5 4
923 59.78 atmosphere 995.0 270 > th dose independent rect. 13 18
933 59.80 temperature 15.0 90 > th dose dependent rect. 23 5
939 59.81 humidity 50.0 270 > th dose independent rect. 17 10
946 59.82 temperature 30.0 270 < th dose independent rect. 22 14
950 59.83 radiation 1.0 10 > th dose independent rect. 5 4
964 59.83 wind 1.0 270 > th dose independent rect. 7 20
986 59.89 humidity 90.0 270 < th dose independent rect. 9 2