Os02g0218200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase M1, membrane alanine aminopeptidase family protein.
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Os02g0218200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase M1, membrane alanine aminopeptidase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.51 | 0.334 | 12.5 | 1.83 | 0.921 | -0.867 | -0.0813 | 1.24 | 0.541 | 18.2 | 25.36 | 1232 | -- | -- |
| 51 | 0.333 | 12.5 | 1.52 | 0.922 | -0.744 | -0.0755 | -- | 0.46 | 18.2 | 25.4 | 1240 | -- | -- |
| 50.53 | 0.331 | 12.5 | 1.83 | 0.92 | -0.865 | -- | 1.24 | 0.538 | 18.2 | 25.4 | 1231 | -- | -- |
| 51.01 | 0.333 | 12.5 | 1.52 | 0.917 | -0.733 | -- | -- | 0.457 | 18.2 | 25.51 | 1237 | -- | -- |
| 93.18 | 0.45 | 12.5 | 1.79 | -- | -0.923 | -- | 0.981 | 0.544 | -- | 24.79 | 1294 | -- | -- |
| 71.18 | 0.396 | 12.5 | 1.29 | 0.962 | -- | 0.000762 | -- | 0.393 | 17.7 | -- | -- | -- | -- |
| 71.18 | 0.395 | 12.5 | 1.29 | 0.962 | -- | -- | -- | 0.393 | 17.7 | -- | -- | -- | -- |
| 93.61 | 0.451 | 12.5 | 1.53 | -- | -0.821 | -- | -- | 0.49 | -- | 24.98 | 1294 | -- | -- |
| 107.6 | 0.483 | 12.6 | -- | 0.907 | -0.462 | -- | -- | 0.214 | 18.2 | 26.92 | 1192 | -- | -- |
| 119.22 | 0.51 | 12.5 | 1.26 | -- | -- | -- | -- | 0.37 | -- | -- | -- | -- | -- |
| 115.02 | 0.502 | 12.6 | -- | 0.942 | -- | -- | -- | 0.25 | 17.8 | -- | -- | -- | -- |
| 150.35 | 0.571 | 12.6 | -- | -- | -0.475 | -- | -- | 0.21 | -- | 27.18 | 1283 | -- | -- |
| 161.04 | 0.592 | 12.6 | -- | -- | -- | -- | -- | 0.231 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 50.32 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 7 | 50.65 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 13 |
| 8 | 50.66 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 8 |
| 67 | 51.02 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 16 | NA |
| 115 | 51.48 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 18 | 14 |
| 177 | 52.07 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 180 | 52.07 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 5 | 21 |
| 184 | 52.07 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 188 | 52.07 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 215 | 52.12 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 227 | 52.14 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 244 | 52.18 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 327 | 52.69 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 332 | 52.71 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 367 | 52.94 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 402 | 53.21 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 17 |
| 407 | 53.23 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 21 |
| 410 | 53.24 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 17 | 6 |
| 434 | 53.32 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 452 | 53.40 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 13 |
| 455 | 53.40 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 17 |
| 457 | 53.41 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 458 | 53.41 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 14 | 5 |
| 459 | 53.41 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 5 |
| 494 | 53.44 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 581 | 53.51 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 23 | NA |
| 737 | 53.56 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 18 | 17 |
| 762 | 53.58 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 16 | 3 |
| 778 | 53.59 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 16 | 8 |
| 784 | 53.60 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 785 | 53.60 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 802 | 53.60 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 17 | 19 |
| 807 | 53.61 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 812 | 53.62 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 16 | 4 |
| 813 | 53.62 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 16 | 16 |
| 838 | 53.63 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 16 | 11 |
| 884 | 53.67 | temperature | 30.0 | 1440 | < th | dose independent | sin | 16 | NA |
| 908 | 53.70 | temperature | 30.0 | 1440 | > th | dose independent | sin | 16 | NA |
| 909 | 53.70 | wind | 5.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 921 | 53.71 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 935 | 53.71 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 947 | 53.73 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 949 | 53.73 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 14 | NA |
| 995 | 53.76 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |