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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0216200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.25 (0.0244) R2 : 0.002
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0491 (0.0514) R2dN8 : 0.00258 R2N8 : 0.002
σ : 0.46
deviance : 97.07
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
93.23 0.454 3.26 0.195 0.0975 0.252 -0.253 1.12 0.0229 4.45 91 5890 -- --
95.03 0.454 3.25 0.112 0.11 0.271 -0.335 -- 0.00687 4.25 108.2 4451 -- --
93.35 0.45 3.26 0.201 0.0995 0.243 -- 1.15 0.0268 5.53 91 5915 -- --
95.1 0.454 3.26 0.126 0.134 0.309 -- -- -0.0132 6.19 115.2 5121 -- --
93.89 0.451 3.26 0.202 -- 0.244 -- 1.15 0.0274 -- 91 5857 -- --
96.08 0.46 3.24 0.0992 0.0976 -- -0.27 -- 0.0568 4.35 -- -- -- --
96.23 0.459 3.24 0.102 0.102 -- -- -- 0.0583 5.44 -- -- -- --
95.67 0.456 3.26 0.128 -- 0.286 -- -- -0.00192 -- 120.4 5569 -- --
95.47 0.455 3.26 -- 0.13 0.294 -- -- -0.0176 6.27 92 5122 -- --
96.78 0.46 3.24 0.105 -- -- -- -- 0.0608 -- -- -- -- --
96.51 0.46 3.25 -- 0.104 -- -- -- 0.0469 5.4 -- -- -- --
96.06 0.456 3.26 -- -- 0.272 -- -- -0.00963 -- 91 5571 -- --
97.07 0.46 3.25 -- -- -- -- -- 0.0491 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 83.45 humidity 90.0 30 < th dose dependent rect. 22 1
2 83.47 humidity 90.0 30 < th dose independent rect. 22 1
3 83.47 temperature 25.0 30 > th dose dependent rect. 22 1
4 83.52 atmosphere 1005.0 30 > th dose dependent rect. 22 1
5 83.53 wind 9.0 1440 < th dose independent rect. 23 1
6 83.53 temperature 10.0 1440 > th dose independent rect. 23 1
9 83.53 temperature 30.0 1440 < th dose independent rect. 23 1
13 83.53 humidity 50.0 1440 > th dose independent rect. 23 1
23 83.53 atmosphere 995.0 1440 > th dose independent rect. 23 1
24 83.53 radiation 1.0 1440 < th dose independent rect. 23 1
44 83.53 temperature 10.0 1440 > th dose independent rect. 24 23
47 83.53 radiation 1.0 1440 < th dose dependent rect. 23 1
52 83.54 wind 1.0 30 > th dose independent rect. 22 1
53 83.54 atmosphere 1005.0 30 > th dose independent rect. 22 1
54 83.55 temperature 15.0 30 > th dose dependent rect. 22 1
59 83.58 temperature 20.0 30 > th dose independent rect. 22 1
60 83.59 wind 5.0 30 < th dose independent rect. 22 1
63 83.59 temperature 10.0 30 > th dose independent rect. 22 1
66 83.59 temperature 30.0 30 < th dose independent rect. 22 1
67 83.59 humidity 50.0 30 > th dose independent rect. 22 1
70 83.59 atmosphere 995.0 30 > th dose independent rect. 22 1
71 83.59 atmosphere 1010.0 30 < th dose independent rect. 22 1
73 83.59 radiation 1.0 30 < th dose independent rect. 22 1
78 83.59 precipitation 0.1 30 < th dose independent rect. 22 1
79 83.59 temperature 10.0 30 > th dose independent rect. 23 23
80 83.59 radiation 1.0 30 < th dose dependent rect. 22 1
85 83.59 precipitation 0.1 30 < th dose dependent rect. 22 1
87 83.61 wind 9.0 30 < th dose dependent rect. 22 1
90 83.64 wind 1.0 30 > th dose dependent rect. 22 1
91 83.66 humidity 50.0 30 > th dose dependent rect. 22 1
99 83.79 atmosphere 1015.0 30 < th dose dependent rect. 22 1
100 83.87 temperature 30.0 30 < th dose dependent rect. 22 1
102 83.88 atmosphere 995.0 30 > th dose independent rect. 23 23
103 83.94 wind 9.0 30 < th dose independent rect. 23 23
156 84.95 temperature 25.0 30 > th dose independent rect. 20 3
169 85.96 temperature 25.0 90 > th dose dependent rect. 20 3
181 86.79 atmosphere 1005.0 30 > th dose dependent rect. 20 3
183 87.13 atmosphere 995.0 720 > th dose independent rect. 23 16
187 87.38 temperature 10.0 720 > th dose independent rect. 15 8
188 87.38 temperature 10.0 720 > th dose independent rect. 23 16
189 87.40 temperature 10.0 720 > th dose independent rect. 3 8
190 87.40 atmosphere 995.0 720 > th dose independent rect. 3 8
191 87.40 temperature 10.0 720 > th dose independent rect. 11 16
195 87.58 wind 9.0 720 < th dose independent rect. 3 8
196 87.63 atmosphere 1015.0 720 < th dose independent rect. 3 8
197 87.65 radiation 40.0 720 < th dose independent rect. 15 8
201 87.87 precipitation 0.1 30 < th dose independent rect. 23 23
202 87.87 precipitation 0.1 30 < th dose dependent rect. 23 23
204 87.95 precipitation 0.1 1440 < th dose independent rect. 23 1
205 87.95 precipitation 0.1 1440 < th dose dependent rect. 23 1
207 87.98 precipitation 0.1 720 < th dose independent rect. 15 8
208 87.98 precipitation 0.1 720 < th dose dependent rect. 15 8
213 88.33 humidity 50.0 720 > th dose independent rect. 3 8
221 88.69 precipitation 0.1 720 < th dose independent rect. 11 16
222 88.69 precipitation 0.1 720 < th dose dependent rect. 11 16
228 88.92 wind 9.0 720 < th dose independent rect. 15 8
237 89.27 humidity 90.0 30 < th dose independent rect. 20 3
241 89.39 atmosphere 1000.0 30 > th dose independent rect. 23 21
247 89.52 humidity 50.0 30 > th dose independent rect. 23 23
250 89.57 atmosphere 1005.0 30 > th dose independent rect. 20 3
251 89.58 precipitation 0.1 720 < th dose independent rect. 3 8
252 89.58 precipitation 0.1 720 < th dose dependent rect. 3 8
254 89.59 temperature 25.0 90 > th dose dependent rect. 20 9
260 89.77 atmosphere 995.0 720 > th dose independent rect. 11 16
261 89.85 atmosphere 995.0 720 > th dose independent rect. 15 8
262 89.88 wind 9.0 720 < th dose independent rect. 23 16
264 89.89 temperature 25.0 720 > th dose dependent rect. 3 5
266 89.95 precipitation 0.1 720 < th dose independent rect. 23 16
268 89.95 precipitation 0.1 720 < th dose dependent rect. 23 16
269 89.96 temperature 25.0 720 > th dose dependent rect. 24 9
278 90.09 humidity 80.0 30 > th dose independent rect. 20 3
285 90.16 humidity 90.0 30 < th dose dependent rect. 20 1
293 90.34 humidity 90.0 10 < th dose independent rect. 20 1
295 90.35 temperature 25.0 90 > th dose independent rect. 20 8
302 90.38 atmosphere 1005.0 30 > th dose independent rect. 20 1
304 90.38 wind 9.0 30 < th dose dependent rect. 20 1
307 90.39 wind 1.0 30 > th dose independent rect. 20 1
308 90.39 wind 7.0 30 < th dose independent rect. 20 1
310 90.39 temperature 10.0 30 > th dose independent rect. 20 1
312 90.39 temperature 30.0 30 < th dose independent rect. 20 1
313 90.39 humidity 50.0 30 > th dose independent rect. 20 1
316 90.39 atmosphere 995.0 30 > th dose independent rect. 20 1
318 90.39 atmosphere 1010.0 30 < th dose independent rect. 20 1
320 90.39 radiation 1.0 30 < th dose independent rect. 20 1
325 90.39 precipitation 0.1 30 < th dose independent rect. 20 1
326 90.39 temperature 25.0 720 > th dose independent rect. 3 6
327 90.39 temperature 10.0 30 > th dose independent rect. 21 23
329 90.39 atmosphere 1015.0 30 < th dose dependent rect. 20 1
330 90.39 radiation 1.0 30 < th dose dependent rect. 20 1
335 90.39 radiation 10.0 1440 < th dose dependent rect. 21 1
336 90.39 precipitation 0.1 30 < th dose dependent rect. 20 1
338 90.42 temperature 10.0 30 > th dose dependent rect. 20 1
339 90.43 atmosphere 995.0 30 > th dose dependent rect. 20 1
349 90.48 atmosphere 995.0 10 > th dose independent rect. 3 23
350 90.48 humidity 50.0 30 > th dose dependent rect. 20 1
356 90.49 temperature 25.0 10 > th dose dependent rect. 20 8
357 90.50 wind 9.0 720 < th dose independent rect. 11 16
359 90.50 wind 1.0 30 > th dose dependent rect. 20 1
376 90.55 temperature 30.0 30 < th dose dependent rect. 20 1
385 90.59 temperature 10.0 1440 > th dose independent rect. 21 1
388 90.59 temperature 30.0 1440 < th dose independent rect. 21 1
392 90.59 humidity 50.0 1440 > th dose independent rect. 21 1
398 90.59 atmosphere 995.0 1440 > th dose independent rect. 21 1
399 90.59 radiation 1.0 1440 < th dose independent rect. 21 1
420 90.59 temperature 10.0 1440 > th dose independent rect. 22 23
470 90.69 wind 5.0 30 < th dose independent rect. 20 3
496 90.84 atmosphere 1000.0 90 > th dose independent rect. 23 12
511 90.95 atmosphere 1015.0 30 < th dose independent rect. 23 23
513 90.96 atmosphere 1000.0 10 > th dose independent rect. 21 23
518 90.98 wind 1.0 720 > th dose independent rect. 15 8
523 90.99 radiation 40.0 30 < th dose dependent rect. 23 12
526 91.01 atmosphere 995.0 30 > th dose dependent rect. 23 21
527 91.03 wind 7.0 30 < th dose dependent rect. 20 3
537 91.10 atmosphere 1000.0 720 > th dose independent rect. 21 14
563 91.25 wind 9.0 30 < th dose independent rect. 21 23
566 91.27 radiation 30.0 30 < th dose independent rect. 23 12
571 91.30 atmosphere 1000.0 720 > th dose independent rect. 23 10
574 91.31 wind 1.0 30 > th dose independent rect. 23 23
578 91.34 wind 1.0 30 > th dose independent rect. 20 3
611 91.51 temperature 10.0 1440 > th dose independent rect. 21 3
614 91.51 temperature 30.0 1440 < th dose independent rect. 21 3
618 91.51 humidity 50.0 1440 > th dose independent rect. 21 3
625 91.51 atmosphere 995.0 1440 > th dose independent rect. 21 3
626 91.51 radiation 1.0 1440 < th dose independent rect. 21 3
646 91.51 temperature 10.0 1440 > th dose independent rect. 24 21
650 91.51 radiation 40.0 1440 < th dose dependent rect. 21 3
652 91.52 radiation 10.0 1440 < th dose dependent rect. 21 3
665 91.57 radiation 40.0 43200 < th dose dependent rect. 21 3
668 91.57 atmosphere 995.0 30 > th dose dependent rect. 23 23
672 91.60 temperature 15.0 30 > th dose independent rect. 23 21
676 91.62 wind 9.0 30 < th dose independent rect. 23 21
678 91.63 precipitation 0.1 30 < th dose independent rect. 20 3
679 91.63 precipitation 0.1 1440 < th dose independent rect. 21 3
682 91.63 precipitation 0.1 30 < th dose dependent rect. 20 3
683 91.63 precipitation 0.1 1440 < th dose dependent rect. 21 3
693 91.66 temperature 10.0 30 > th dose independent rect. 20 3
695 91.66 temperature 30.0 30 < th dose independent rect. 20 3
696 91.66 humidity 50.0 30 > th dose independent rect. 20 3
700 91.66 atmosphere 1010.0 30 < th dose independent rect. 20 3
702 91.66 radiation 1.0 30 < th dose independent rect. 20 3
708 91.66 radiation 1.0 30 < th dose dependent rect. 20 3
715 91.67 humidity 80.0 14400 < th dose dependent rect. 2 7
717 91.68 atmosphere 1005.0 10 > th dose dependent rect. 2 2
724 91.71 temperature 10.0 30 > th dose dependent rect. 23 21
727 91.73 atmosphere 1005.0 90 > th dose dependent rect. 2 1
752 91.82 temperature 25.0 720 < th dose independent rect. 2 7
753 91.82 temperature 10.0 720 > th dose dependent rect. 23 1
757 91.84 humidity 50.0 720 > th dose independent rect. 23 16
768 91.89 radiation 10.0 30 < th dose independent rect. 23 11
772 91.90 radiation 10.0 30 < th dose independent rect. 23 9
776 91.91 precipitation 0.1 30 < th dose independent rect. 23 21
778 91.91 precipitation 0.1 30 < th dose dependent rect. 23 21
816 91.97 wind 1.0 10 > th dose independent rect. 23 21
821 92.02 temperature 30.0 90 < th dose independent rect. 11 12
822 92.02 radiation 10.0 30 < th dose independent rect. 23 23
829 92.04 humidity 50.0 30 > th dose dependent rect. 20 3
835 92.06 humidity 50.0 30 > th dose independent rect. 23 21
836 92.06 precipitation 0.1 30 < th dose independent rect. 21 23
838 92.06 precipitation 0.1 30 < th dose dependent rect. 21 23
839 92.07 temperature 30.0 720 < th dose independent rect. 15 8
845 92.08 atmosphere 1010.0 30 < th dose dependent rect. 2 1
848 92.11 atmosphere 1000.0 90 > th dose independent rect. 11 12
851 92.13 temperature 10.0 30 > th dose dependent rect. 23 8
853 92.14 atmosphere 1000.0 30 > th dose independent rect. 23 10
857 92.16 humidity 90.0 90 < th dose independent rect. 1 22
862 92.17 temperature 30.0 90 < th dose independent rect. 23 12
875 92.19 radiation 1.0 4320 < th dose dependent rect. 24 3
878 92.20 temperature 25.0 720 > th dose independent rect. 8 1
881 92.20 atmosphere 1015.0 90 < th dose independent rect. 11 12
885 92.23 atmosphere 1000.0 30 > th dose independent rect. 23 8
887 92.23 temperature 30.0 270 < th dose independent rect. 9 12
888 92.23 precipitation 0.1 90 < th dose independent rect. 11 12
892 92.23 precipitation 0.1 90 < th dose dependent rect. 11 12
893 92.23 atmosphere 995.0 90 > th dose dependent rect. 3 16
894 92.23 temperature 10.0 30 > th dose dependent rect. 23 23
895 92.24 atmosphere 995.0 720 > th dose dependent rect. 23 1
896 92.25 wind 3.0 10 < th dose independent rect. 2 1
897 92.25 temperature 10.0 1440 > th dose independent rect. 24 8
904 92.25 humidity 50.0 1440 > th dose independent rect. 24 8
909 92.25 atmosphere 995.0 1440 > th dose independent rect. 24 8
910 92.25 temperature 10.0 1440 > th dose independent rect. 8 16
913 92.25 precipitation 0.1 30 < th dose independent rect. 7 16
914 92.25 temperature 15.0 10 > th dose independent rect. 3 23
915 92.25 wind 5.0 10 < th dose dependent rect. 2 1
918 92.25 precipitation 0.1 30 < th dose dependent rect. 7 16
923 92.26 humidity 50.0 30 > th dose dependent rect. 23 12
924 92.27 humidity 50.0 90 > th dose independent rect. 23 12
928 92.28 wind 1.0 30 < th dose dependent rect. 2 1
932 92.29 wind 9.0 90 < th dose independent rect. 23 12
933 92.29 temperature 10.0 90 > th dose independent rect. 11 12
934 92.29 temperature 10.0 90 > th dose independent rect. 23 12
940 92.30 temperature 25.0 10 < th dose independent rect. 2 1
947 92.32 temperature 10.0 10 > th dose independent rect. 2 1
950 92.32 humidity 50.0 10 > th dose independent rect. 2 1
953 92.32 atmosphere 995.0 10 > th dose independent rect. 2 1
954 92.32 atmosphere 1010.0 10 < th dose independent rect. 2 1
956 92.32 radiation 1.0 10 < th dose independent rect. 2 1
961 92.32 precipitation 0.1 10 < th dose independent rect. 2 1
965 92.32 humidity 90.0 30 > th dose dependent rect. 2 1
966 92.32 radiation 1.0 10 < th dose dependent rect. 2 1
971 92.32 precipitation 0.1 10 < th dose dependent rect. 2 1
979 92.33 temperature 15.0 30 > th dose independent rect. 23 8
981 92.33 temperature 10.0 10 > th dose dependent rect. 2 1
982 92.33 humidity 50.0 10 > th dose dependent rect. 2 1