Os02g0215600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Non-protein coding transcript, uncharacterized transcript.
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Os02g0215600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Non-protein coding transcript, uncharacterized transcript.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.32 | 0.343 | 9.24 | 0.256 | 0.348 | 0.599 | -0.461 | 0.0344 | -0.0891 | 0.94 | 8.308 | 10 | -- | -- |
| 53.33 | 0.34 | 9.24 | 0.254 | 0.348 | 0.599 | -0.426 | -- | -0.0892 | 0.941 | 8.291 | 9 | -- | -- |
| 53.65 | 0.341 | 9.25 | 0.265 | 0.302 | 0.627 | -- | -0.236 | -0.1 | 0.829 | 8.283 | 8 | -- | -- |
| 54.04 | 0.342 | 9.23 | 0.266 | 0.352 | 0.587 | -- | -- | -0.0865 | 0.737 | 8.31 | 8 | -- | -- |
| 56.2 | 0.349 | 9.22 | 0.237 | -- | 0.811 | -- | -0.308 | -0.0744 | -- | 8.31 | 8 | -- | -- |
| 63.67 | 0.374 | 9.25 | 0.291 | 0.991 | -- | -0.374 | -- | -0.0788 | 0.238 | -- | -- | -- | -- |
| 64.27 | 0.375 | 9.25 | 0.306 | 0.992 | -- | -- | -- | -0.0769 | 0.222 | -- | -- | -- | -- |
| 56.65 | 0.351 | 9.23 | 0.258 | -- | 0.82 | -- | -- | -0.0974 | -- | 8.31 | 8 | -- | -- |
| 55.97 | 0.348 | 9.24 | -- | 0.351 | 0.598 | -- | -- | -0.11 | 0.91 | 8.13 | 8 | -- | -- |
| 126.2 | 0.525 | 9.23 | 0.338 | -- | -- | -- | -- | -0.0619 | -- | -- | -- | -- | -- |
| 66.74 | 0.382 | 9.25 | -- | 0.996 | -- | -- | -- | -0.111 | 0.238 | -- | -- | -- | -- |
| 58.41 | 0.356 | 9.24 | -- | -- | 0.824 | -- | -- | -0.125 | -- | 8.31 | 8 | -- | -- |
| 129.21 | 0.531 | 9.23 | -- | -- | -- | -- | -- | -0.0993 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.85 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 2 | 50.23 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 3 | 50.31 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 17 |
| 5 | 50.62 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 9 |
| 6 | 50.62 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 9 |
| 8 | 50.76 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 9 | 50.76 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 10 | 50.76 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 11 | 50.77 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 3 | 17 |
| 13 | 50.92 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 14 | 51.00 | radiation | 10.0 | 10 | < th | dose independent | rect. | 3 | 17 |
| 16 | 51.02 | radiation | 10.0 | 10 | < th | dose dependent | sin | 1 | NA |
| 18 | 51.10 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 20 | 51.12 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 21 | 51.14 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 7 |
| 23 | 51.16 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 15 |
| 24 | 51.16 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 15 |
| 25 | 51.23 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 26 | 51.23 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 17 | 8 |
| 27 | 51.27 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 5 |
| 28 | 51.35 | humidity | 90.0 | 90 | < th | dose independent | rect. | 20 | 19 |
| 29 | 51.37 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 32 | 51.41 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 36 | 51.43 | wind | 1.0 | 270 | > th | dose independent | rect. | 18 | 7 |
| 39 | 51.51 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 7 |
| 45 | 51.52 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 17 |
| 47 | 51.53 | radiation | 1.0 | 270 | < th | dose independent | rect. | 18 | 7 |
| 49 | 51.55 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 24 | 17 |
| 52 | 51.57 | radiation | 1.0 | 270 | > th | dose independent | rect. | 4 | 10 |
| 74 | 51.63 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 7 |
| 81 | 51.63 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 17 |
| 82 | 51.63 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 88 | 51.68 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 7 |
| 89 | 51.68 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 7 |
| 91 | 51.68 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 7 |
| 97 | 51.76 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 7 |
| 99 | 51.76 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 3 | 15 |
| 104 | 51.82 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 17 |
| 105 | 51.82 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 17 |
| 141 | 52.03 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 160 | 52.13 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 20 | 7 |
| 165 | 52.16 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 16 |
| 172 | 52.21 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 177 | 52.24 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 14 | 19 |
| 190 | 52.27 | radiation | 10.0 | 10 | < th | dose independent | rect. | 3 | 15 |
| 202 | 52.32 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 17 |
| 213 | 52.37 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 18 |
| 253 | 52.55 | radiation | 10.0 | 10 | < th | dose independent | rect. | 1 | 21 |
| 270 | 52.59 | radiation | 1.0 | 10 | > th | dose independent | rect. | 7 | 9 |
| 274 | 52.60 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 295 | 52.67 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 18 |
| 319 | 52.73 | radiation | 1.0 | 270 | < th | dose dependent | sin | 4 | NA |
| 341 | 52.79 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 371 | 52.85 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 17 |
| 373 | 52.86 | wind | 1.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 376 | 52.86 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 1 | 21 |
| 378 | 52.87 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 17 |
| 380 | 52.88 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 20 | 7 |
| 386 | 52.88 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 20 | 7 |
| 390 | 52.89 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 398 | 52.90 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 408 | 52.93 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 20 | 20 |
| 409 | 52.93 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 411 | 52.94 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 449 | 52.96 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 471 | 52.99 | wind | 7.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 475 | 52.99 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 24 | 9 |
| 478 | 53.00 | temperature | 15.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 483 | 53.01 | temperature | 10.0 | 10 | > th | dose independent | rect. | 20 | 7 |
| 484 | 53.01 | temperature | 30.0 | 10 | < th | dose independent | rect. | 20 | 7 |
| 485 | 53.01 | humidity | 50.0 | 10 | > th | dose independent | rect. | 20 | 7 |
| 488 | 53.01 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 20 | 7 |
| 492 | 53.01 | radiation | 1.0 | 10 | < th | dose independent | rect. | 20 | 7 |
| 499 | 53.01 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 17 |
| 502 | 53.01 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 3 | 17 |
| 505 | 53.01 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 20 | 7 |
| 519 | 53.03 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 20 | 19 |
| 521 | 53.04 | wind | 9.0 | 10 | < th | dose independent | rect. | 20 | 7 |
| 530 | 53.07 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 545 | 53.09 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 17 |
| 550 | 53.09 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 17 |
| 558 | 53.11 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 560 | 53.11 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 561 | 53.11 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 565 | 53.11 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 575 | 53.11 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 6 | 9 |
| 587 | 53.13 | humidity | 90.0 | 90 | < th | dose independent | rect. | 6 | 9 |
| 588 | 53.13 | humidity | 90.0 | 10 | < th | dose independent | rect. | 7 | 9 |
| 589 | 53.13 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 3 | 7 |
| 596 | 53.14 | wind | 7.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 610 | 53.16 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 20 |
| 615 | 53.16 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 628 | 53.19 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 4 |
| 631 | 53.19 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 687 | 53.26 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 688 | 53.26 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 689 | 53.26 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 693 | 53.26 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 694 | 53.26 | radiation | 20.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 737 | 53.30 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 18 |
| 739 | 53.30 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 18 |
| 747 | 53.32 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 6 |
| 748 | 53.32 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 756 | 53.34 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 770 | 53.35 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 18 | 7 |
| 790 | 53.39 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 795 | 53.40 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 812 | 53.42 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 821 | 53.44 | radiation | 1.0 | 270 | > th | dose independent | sin | 4 | NA |
| 835 | 53.47 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 864 | 53.50 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 865 | 53.51 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 18 |
| 867 | 53.51 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 18 |
| 887 | 53.56 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 24 | 6 |
| 900 | 53.58 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 6 |
| 902 | 53.58 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 6 |
| 914 | 53.60 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 916 | 53.60 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 921 | 53.60 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 923 | 53.60 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 928 | 53.61 | radiation | 1.0 | 270 | < th | dose independent | sin | 4 | NA |