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Os02g0214600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.88 (0.0266) R2 : 0.313
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.72 (0.12) R2dE : 0.33 R2E : 0.256
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.299 (0.0575) R2dN8 : 0.0568 R2N8 : -0.0172
σ : 0.496
deviance : 112.75
__
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C
peak time of C : --
E
wheather : temperature
threshold : 15.93
memory length : 16
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
98.09 0.465 5.86 0.502 0.5 -2.13 0.384 0.385 0.414 18.3 15.68 37 -- --
98.23 0.462 5.87 0.463 0.509 -2.17 0.402 -- 0.405 18.2 15.5 38 -- --
98.38 0.462 5.86 0.524 0.506 -2.06 -- 0.569 0.425 18.2 16.56 37 -- --
98.64 0.463 5.87 0.443 0.506 -2.12 -- -- 0.401 18.2 15.73 37 -- --
109.2 0.489 5.86 0.444 -- -1.82 -- 0.557 0.375 -- 16.14 24 -- --
146.23 0.567 5.94 0.0195 0.53 -- 0.402 -- 0.0886 23.3 -- -- -- --
146.92 0.568 5.94 0.00326 0.528 -- -- -- 0.0872 23.3 -- -- -- --
109.43 0.489 5.87 0.367 -- -1.88 -- -- 0.352 -- 15.3 20 -- --
103.24 0.473 5.89 -- 0.466 -1.85 -- -- 0.327 18.6 16.59 37 -- --
164.37 0.599 5.93 0.0165 -- -- -- -- 0.0921 -- -- -- -- --
146.92 0.567 5.94 -- 0.528 -- -- -- 0.0868 23.3 -- -- -- --
112.75 0.496 5.88 -- -- -1.72 -- -- 0.299 -- 15.93 16 -- --
164.38 0.598 5.93 -- -- -- -- -- 0.0903 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 98.42 temperature 15.0 30 > th dose dependent no NA NA
6 99.23 temperature 30.0 30 < th dose dependent rect. 3 23
7 99.34 temperature 20.0 30 > th dose dependent rect. 2 23
10 99.46 temperature 20.0 30 > th dose dependent rect. 11 23
13 99.83 temperature 30.0 90 < th dose dependent rect. 19 23
18 100.44 temperature 30.0 30 < th dose dependent rect. 9 23
19 100.53 temperature 30.0 30 < th dose dependent rect. 17 23
21 100.57 temperature 30.0 30 < th dose dependent no NA NA
24 100.77 temperature 20.0 30 > th dose dependent rect. 15 23
26 101.00 temperature 30.0 30 < th dose dependent rect. 15 23
27 101.04 temperature 30.0 30 < th dose dependent rect. 13 23
28 101.08 temperature 30.0 30 < th dose dependent rect. 11 23
30 101.10 temperature 30.0 90 < th dose dependent rect. 7 23
38 101.22 temperature 20.0 90 > th dose dependent rect. 6 23
43 101.62 temperature 20.0 90 > th dose dependent rect. 23 23
44 101.69 temperature 20.0 90 > th dose dependent rect. 13 23
45 101.69 temperature 30.0 30 < th dose dependent rect. 5 23
47 101.73 temperature 20.0 30 > th dose dependent rect. 4 23
61 102.18 temperature 20.0 10 > th dose dependent rect. 13 23
67 102.43 temperature 30.0 30 < th dose dependent rect. 1 23
79 102.90 temperature 30.0 30 < th dose dependent rect. 23 23
126 104.20 temperature 30.0 30 < th dose dependent rect. 5 21
138 104.46 temperature 20.0 270 > th dose dependent rect. 17 23
216 105.66 temperature 30.0 90 < th dose dependent rect. 19 20
260 106.22 temperature 30.0 270 < th dose dependent rect. 1 23
362 107.59 temperature 30.0 30 < th dose dependent rect. 9 17
393 107.85 temperature 25.0 270 < th dose independent rect. 5 22
456 108.67 temperature 25.0 270 < th dose independent rect. 7 19
469 108.79 wind 7.0 43200 > th dose independent rect. 10 2
472 108.82 wind 7.0 43200 < th dose independent rect. 10 2
492 109.06 temperature 20.0 1440 > th dose dependent rect. 3 9
495 109.10 wind 7.0 43200 > th dose independent rect. 5 9
507 109.21 wind 7.0 43200 < th dose independent rect. 5 9
511 109.26 humidity 90.0 43200 > th dose independent rect. 2 10
523 109.37 temperature 20.0 1440 > th dose dependent rect. 21 15
535 109.42 wind 5.0 43200 > th dose dependent rect. 10 2
559 109.59 temperature 10.0 1440 > th dose dependent rect. 5 7
588 109.71 temperature 10.0 1440 > th dose dependent rect. 6 4
593 109.73 humidity 90.0 43200 > th dose independent rect. 9 1
594 109.73 temperature 10.0 1440 > th dose dependent rect. 7 2
606 109.77 wind 5.0 43200 > th dose dependent rect. 5 10
607 109.78 wind 7.0 43200 > th dose independent rect. 20 19
613 109.81 temperature 25.0 270 > th dose independent rect. 11 23
620 109.82 wind 7.0 43200 > th dose dependent rect. 9 6
625 109.85 temperature 30.0 1440 < th dose dependent rect. 6 4
626 109.86 temperature 20.0 1440 > th dose dependent sin 6 NA
644 109.91 temperature 30.0 1440 < th dose dependent rect. 7 2
661 109.95 radiation 1.0 14400 > th dose independent rect. 5 2
672 109.97 radiation 1.0 14400 < th dose independent rect. 5 2
686 110.00 wind 7.0 43200 < th dose independent rect. 20 19
702 110.04 wind 7.0 43200 > th dose independent rect. 23 16
709 110.07 humidity 90.0 43200 < th dose independent rect. 22 1
727 110.11 temperature 30.0 1440 < th dose dependent rect. 6 6
752 110.17 humidity 90.0 43200 > th dose independent sin 5 NA
760 110.19 wind 7.0 43200 < th dose independent rect. 23 16
790 110.26 humidity 90.0 43200 < th dose independent rect. 10 1
801 110.28 precipitation 0.1 43200 < th dose independent rect. 4 2
806 110.28 precipitation 0.1 43200 < th dose dependent rect. 4 2
818 110.31 radiation 30.0 4320 > th dose dependent rect. 15 18
828 110.33 precipitation 0.1 43200 > th dose dependent rect. 4 2
856 110.40 precipitation 0.1 43200 < th dose independent rect. 4 6
858 110.40 precipitation 0.1 43200 < th dose dependent rect. 4 6
861 110.41 humidity 90.0 43200 > th dose independent rect. 22 15
868 110.43 precipitation 0.1 43200 > th dose dependent rect. 4 6
871 110.44 precipitation 0.1 43200 > th dose independent rect. 4 2
885 110.45 radiation 1.0 14400 < th dose independent rect. 24 7
895 110.46 radiation 1.0 14400 < th dose independent rect. 2 5
902 110.46 wind 7.0 43200 > th dose dependent rect. 19 20
904 110.47 precipitation 0.1 43200 > th dose independent rect. 4 6
907 110.47 radiation 40.0 4320 < th dose dependent rect. 18 12
913 110.49 wind 9.0 43200 > th dose independent rect. 9 12
929 110.53 temperature 20.0 1440 > th dose dependent rect. 11 1
939 110.56 wind 9.0 43200 > th dose independent rect. 9 16
957 110.59 wind 9.0 43200 < th dose independent rect. 8 13
963 110.60 wind 7.0 43200 > th dose independent sin 4 NA
968 110.61 wind 9.0 43200 < th dose independent rect. 9 15