Os02g0211000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ABC transporter related domain containing protein.
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Os02g0211000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ABC transporter related domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 243.93 | 0.734 | 6.14 | 0.931 | 4.29 | 2.3 | 1.58 | 4.38 | -0.609 | 7.57 | 1.246 | 14414 | -- | -- |
| 299.55 | 0.806 | 6.22 | 0.925 | 4.19 | 1.91 | 1.12 | -- | -0.66 | 7.48 | 10.01 | 16257 | -- | -- |
| 250.66 | 0.737 | 6.14 | 0.969 | 4.28 | 2.3 | -- | 4.39 | -0.613 | 7.54 | 1.269 | 14432 | -- | -- |
| 288.76 | 0.791 | 6.35 | 0.585 | 4.22 | 2.01 | -- | -- | -1.06 | 7.53 | 10 | 13339 | -- | -- |
| 1165.79 | 1.6 | 6.26 | 0.594 | -- | 1.32 | -- | 0.496 | -0.258 | -- | 1.691 | 15957 | -- | -- |
| 361.01 | 0.891 | 6.14 | 0.488 | 4.31 | -- | 1.64 | -- | -0.275 | 7.49 | -- | -- | -- | -- |
| 368.47 | 0.899 | 6.14 | 0.526 | 4.31 | -- | -- | -- | -0.278 | 7.48 | -- | -- | -- | -- |
| 1167.38 | 1.6 | 6.26 | 0.593 | -- | 1.32 | -- | -- | -0.26 | -- | 1.691 | 15957 | -- | -- |
| 274.01 | 0.771 | 6.35 | -- | 4.41 | 1.86 | -- | -- | -1.04 | 7.39 | 10.02 | 13398 | -- | -- |
| 1363.12 | 1.73 | 6.25 | 0.592 | -- | -- | -- | -- | -0.209 | -- | -- | -- | -- | -- |
| 375.77 | 0.907 | 6.16 | -- | 4.32 | -- | -- | -- | -0.336 | 7.47 | -- | -- | -- | -- |
| 1176.65 | 1.6 | 6.27 | -- | -- | 1.32 | -- | -- | -0.325 | -- | 1.691 | 15957 | -- | -- |
| 1372.38 | 1.73 | 6.26 | -- | -- | -- | -- | -- | -0.275 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 231.43 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 3 | 232.65 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 14 | 2 |
| 5 | 233.19 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 14 | 4 |
| 8 | 233.53 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 10 | 233.73 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 13 | 8 |
| 16 | 233.96 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 8 | 13 |
| 17 | 233.96 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 13 | 6 |
| 39 | 234.38 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 14 | 3 |
| 42 | 234.40 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 14 | 2 |
| 47 | 234.48 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 49 | 234.52 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 14 | 5 |
| 62 | 234.64 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 9 | 10 |
| 66 | 234.69 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 13 | 5 |
| 70 | 234.70 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 8 | 12 |
| 93 | 234.92 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 99 | 234.99 | humidity | 80.0 | 43200 | > th | dose independent | sin | 22 | NA |
| 156 | 235.53 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 5 |
| 203 | 235.96 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 224 | 236.07 | humidity | 80.0 | 43200 | < th | dose independent | sin | 22 | NA |
| 237 | 236.18 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 249 | 236.25 | humidity | 70.0 | 43200 | > th | dose dependent | sin | 22 | NA |
| 254 | 236.29 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 277 | 236.42 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 281 | 236.46 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 289 | 236.50 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 294 | 236.56 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 359 | 236.92 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 6 | 4 |
| 440 | 237.42 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 571 | 238.04 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 586 | 238.13 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 14 | 11 |
| 613 | 238.26 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 639 | 238.39 | humidity | 90.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 657 | 238.46 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 687 | 238.52 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 13 | 17 |
| 728 | 238.65 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 13 | 17 |
| 736 | 238.68 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 19 | 15 |
| 744 | 238.70 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 745 | 238.70 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 22 | 8 |
| 754 | 238.73 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 772 | 238.77 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 783 | 238.79 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 20 | 5 |
| 790 | 238.81 | humidity | 90.0 | 43200 | < th | dose independent | sin | 15 | NA |
| 840 | 238.96 | humidity | 90.0 | 43200 | < th | dose dependent | sin | 19 | NA |
| 864 | 239.03 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 7 |
| 914 | 239.19 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 6 | 10 |
| 933 | 239.26 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 963 | 239.33 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 9 |