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Os02g0209400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.72 (0.0529) R2 : 0.628
β1 : 3.04 (0.194) R2dD : 0.209 R2D : 0.147
β2 : 2.59 (0.133) R2dC : 0.309 R2C : 0.267
β3 : 2.98 (0.281) R2dE : 0.0923 R2E : 0.0782
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.11 (0.113) R2dN8 : 0.105 R2N8 : 0.00721
σ : 0.989
deviance : 450.73
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C
peak time of C : 15.6
E
wheather : temperature
threshold : 29.47
memory length : 2253
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 7.3
open length of G : 0.864

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
452.21 0.999 6.93 1.15 2.58 8.53 1.4 -53.9 1.1 15.6 30.26 4858 7.9 1.08
444.62 0.982 6.72 3.02 2.58 2.97 1.43 -- 1.1 15.6 29.43 2222 7.29 0.834
452.68 0.991 6.89 1.49 2.59 8.57 -- -53.2 1.09 15.5 30.16 4833 7.89 0.825
450.73 0.989 6.72 3.04 2.59 2.98 -- -- 1.11 15.6 29.47 2253 7.3 0.864
823.01 1.34 6.88 1.33 -- 8.97 -- -56.9 1.04 -- 30 4112 8.31 0.347
555.08 1.1 6.75 3.13 2.59 -- 1.43 -- 1 15.6 -- -- -- --
561.27 1.11 6.74 3.16 2.6 -- -- -- 1.01 15.5 -- -- -- --
824.75 1.34 6.72 2.93 -- 3 -- -- 1.04 -- 29.67 2220 7.42 0.858
693.18 1.23 6.79 -- 2.53 3.23 -- -- 0.78 15.6 29.32 2480 7.31 0.938
937.26 1.43 6.74 3.05 -- -- -- -- 0.94 -- -- -- -- --
823.86 1.34 6.82 -- 2.53 -- -- -- 0.658 15.6 -- -- -- --
789.37 1.31 6.84 -- -- 3.53 -- -- 0.47 -- 3.388 1969 9.18 1.52
1182.22 1.6 6.81 -- -- -- -- -- 0.602 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 468.39 temperature 30 4320 > th dose dependent rect. 8 1
29 479.51 wind 1 4320 < th dose independent rect. 6 1
30 481.35 wind 1 4320 > th dose independent rect. 6 1
31 483.11 wind 1 4320 < th dose dependent rect. 6 2
34 488.92 temperature 30 4320 > th dose independent rect. 8 1
49 489.48 temperature 30 720 > th dose dependent rect. 18 1
63 489.53 humidity 70 720 > th dose independent rect. 17 15
64 489.63 temperature 30 720 > th dose independent rect. 18 1
79 489.85 wind 1 1440 > th dose independent rect. 6 5
81 490.52 wind 1 1440 < th dose independent rect. 6 4
82 490.57 humidity 80 720 < th dose dependent rect. 18 4
90 492.33 humidity 70 720 < th dose independent rect. 18 13
92 492.63 humidity 70 720 < th dose independent rect. 18 2
122 494.18 humidity 70 720 > th dose independent rect. 17 7
129 496.51 humidity 70 720 > th dose independent rect. 19 8
135 497.05 humidity 70 720 < th dose dependent rect. 18 13
151 497.57 temperature 30 4320 < th dose independent rect. 19 14
285 504.24 radiation 1 720 < th dose independent rect. 9 3
286 504.24 radiation 1 720 < th dose dependent rect. 9 3
288 504.49 radiation 1 270 < th dose independent rect. 9 6
289 504.49 radiation 1 270 < th dose dependent rect. 9 6
291 504.64 humidity 80 720 > th dose independent rect. 20 2
297 504.77 temperature 30 4320 < th dose independent rect. 8 1
299 505.13 humidity 80 720 < th dose dependent sin 12 NA
320 505.94 humidity 50 1440 < th dose independent rect. 16 1
323 506.12 humidity 50 1440 < th dose dependent rect. 16 1
328 506.35 humidity 60 1440 > th dose independent rect. 15 2
335 506.61 humidity 70 720 > th dose independent sin 12 NA
338 506.71 humidity 70 720 < th dose independent sin 13 NA
390 507.42 atmosphere 1005 90 > th dose independent rect. 4 1
394 507.61 temperature 30 720 < th dose independent rect. 17 15
399 507.82 temperature 30 4320 < th dose independent rect. 24 9
418 508.80 atmosphere 1005 90 > th dose independent rect. 3 6
423 508.92 temperature 30 1440 < th dose independent rect. 18 11
434 509.25 atmosphere 1005 10 > th dose independent rect. 4 2
441 509.44 radiation 20 720 < th dose independent rect. 11 20
450 509.56 humidity 60 1440 > th dose independent rect. 14 14
454 509.59 humidity 60 1440 > th dose independent rect. 14 11
468 509.82 temperature 30 1440 < th dose independent rect. 18 9
493 509.93 temperature 30 4320 < th dose independent rect. 4 5
506 510.20 atmosphere 1005 270 > th dose independent rect. 1 8
511 510.34 wind 1 90 < th dose independent rect. 4 1
551 510.83 wind 1 90 < th dose dependent rect. 4 1
590 511.55 atmosphere 1005 270 > th dose independent rect. 1 5
610 511.81 temperature 20 10 > th dose independent rect. 22 20
701 512.58 atmosphere 1005 90 > th dose independent rect. 3 4
708 512.74 temperature 30 1440 < th dose independent rect. 18 5
711 512.77 temperature 10 270 > th dose dependent rect. 20 19
727 512.95 radiation 40 1440 > th dose dependent rect. 13 20
785 513.57 radiation 40 1440 > th dose dependent rect. 13 2
791 513.60 wind 5 270 < th dose independent rect. 15 4
811 513.63 temperature 10 10 > th dose dependent rect. 22 20
839 513.89 wind 3 10 < th dose dependent rect. 4 2
882 514.26 temperature 25 90 < th dose independent rect. 4 1
883 514.33 radiation 10 14400 > th dose independent rect. 5 1
911 514.54 humidity 60 90 > th dose independent rect. 3 9
915 514.60 atmosphere 1005 90 > th dose independent rect. 3 8
932 514.85 wind 1 43200 < th dose dependent rect. 6 6
936 514.92 humidity 90 4320 > th dose independent rect. 7 1
966 515.27 temperature 30 270 < th dose independent rect. 1 10
971 515.43 humidity 90 4320 < th dose independent rect. 7 1
972 515.44 humidity 60 1440 < th dose dependent sin 14 NA