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Os02g0208200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13 (0.0165) R2 : 0.0619
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.191 (0.0348) R2dN8 : 0.0799 R2N8 : 0.0619
σ : 0.311
deviance : 44.39
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
17.27 0.195 13.1 -0.595 0.61 -0.568 -0.194 5.73 0.184 17.3 30 4233 -- --
20.45 0.211 13 0.38 0.625 0.0411 -0.172 -- 0.275 17.2 26.9 17545 -- --
17.36 0.194 13.1 -0.593 0.611 -0.566 -- 5.73 0.185 17.3 30 4221 -- --
20.37 0.21 13 0.474 0.628 0.104 -- -- 0.299 17.3 26.63 47520 -- --
36.57 0.282 13.1 -0.75 -- -0.633 -- 6.56 0.157 -- 30 4223 -- --
20.51 0.212 13 0.364 0.631 -- -0.162 -- 0.245 17.2 -- -- -- --
20.57 0.212 13 0.364 0.63 -- -- -- 0.244 17.3 -- -- -- --
35.93 0.28 13 0.281 -- -0.238 -- -- 0.16 -- 26.67 47520 -- --
22.65 0.222 13 -- 0.629 -0.167 -- -- 0.141 17.2 27.1 46795 -- --
41.3 0.3 13 0.343 -- -- -- -- 0.229 -- -- -- -- --
24.07 0.23 13 -- 0.624 -- -- -- 0.204 17.3 -- -- -- --
36.7 0.283 13 -- -- -0.274 -- -- 0.114 -- 26.19 47520 -- --
44.39 0.311 13 -- -- -- -- -- 0.191 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 17.11 temperature 30.0 4320 < th dose independent rect. 14 22
3 17.19 temperature 30.0 4320 > th dose independent rect. 14 22
4 17.21 atmosphere 1000.0 90 > th dose independent rect. 17 10
8 17.24 temperature 30.0 4320 > th dose independent rect. 9 7
24 17.24 temperature 30.0 4320 < th dose independent rect. 18 22
26 17.25 temperature 30.0 4320 < th dose independent rect. 22 18
32 17.26 temperature 30.0 4320 < th dose independent rect. 7 9
33 17.26 temperature 30.0 4320 < th dose independent rect. 5 11
41 17.27 temperature 30.0 4320 < th dose independent rect. 9 7
47 17.29 temperature 25.0 4320 < th dose independent rect. 5 3
49 17.29 temperature 30.0 4320 < th dose independent rect. 14 18
51 17.30 temperature 30.0 4320 < th dose independent rect. 14 13
52 17.30 temperature 30.0 4320 < th dose independent rect. 14 15
57 17.31 temperature 30.0 4320 < th dose independent rect. 14 7
69 17.32 temperature 25.0 4320 > th dose independent rect. 5 3
70 17.32 temperature 30.0 4320 < th dose independent rect. 14 5
87 17.33 humidity 90.0 720 < th dose dependent rect. 19 3
88 17.34 temperature 30.0 4320 < th dose independent sin 17 NA
92 17.34 temperature 30.0 4320 < th dose independent rect. 15 1
113 17.35 temperature 30.0 4320 < th dose independent sin 12 NA
120 17.35 temperature 30.0 4320 < th dose independent no NA NA
121 17.35 temperature 30.0 4320 < th dose independent rect. 7 14
122 17.35 temperature 30.0 4320 < th dose independent rect. 9 14
216 17.36 temperature 30.0 4320 > th dose independent sin 19 NA
221 17.36 temperature 30.0 4320 > th dose independent rect. 14 5
280 17.37 temperature 30.0 4320 > th dose independent rect. 15 1
305 17.38 temperature 30.0 4320 > th dose independent no NA NA
442 17.38 atmosphere 995.0 90 > th dose dependent rect. 17 10
474 17.40 radiation 20.0 1440 < th dose independent rect. 10 3
583 17.48 temperature 25.0 1440 > th dose dependent rect. 2 7
602 17.49 temperature 25.0 1440 > th dose dependent rect. 6 3
621 17.50 radiation 30.0 1440 < th dose dependent rect. 10 3
627 17.51 temperature 25.0 4320 > th dose dependent rect. 17 16
628 17.51 radiation 30.0 4320 > th dose dependent rect. 15 17
640 17.52 temperature 25.0 4320 > th dose dependent rect. 17 14
648 17.53 radiation 30.0 90 < th dose dependent rect. 7 20
650 17.54 humidity 80.0 720 < th dose independent rect. 19 2
655 17.54 temperature 25.0 4320 > th dose dependent rect. 18 1
668 17.56 temperature 25.0 4320 > th dose dependent rect. 17 10
674 17.57 wind 1.0 14400 < th dose dependent rect. 23 3
680 17.58 temperature 25.0 4320 > th dose dependent rect. 18 5
690 17.60 wind 7.0 90 < th dose independent rect. 17 10
722 17.66 temperature 30.0 4320 > th dose dependent rect. 15 1
729 17.68 atmosphere 1000.0 270 > th dose independent rect. 15 10
730 17.68 precipitation 0.1 90 < th dose independent rect. 3 14
732 17.68 precipitation 0.1 90 < th dose dependent rect. 3 14
737 17.69 radiation 20.0 4320 < th dose independent rect. 15 18
746 17.70 atmosphere 1000.0 90 > th dose independent rect. 7 20
747 17.70 radiation 10.0 90 < th dose independent rect. 7 20
748 17.70 temperature 25.0 4320 > th dose dependent sin 10 NA
757 17.73 atmosphere 1005.0 270 > th dose independent rect. 23 7
759 17.73 atmosphere 1005.0 270 < th dose dependent rect. 24 7
766 17.75 temperature 10.0 90 > th dose independent rect. 17 10
767 17.75 radiation 20.0 90 < th dose independent rect. 17 10
770 17.75 temperature 10.0 90 > th dose independent rect. 3 14
771 17.75 atmosphere 1015.0 90 < th dose independent rect. 3 14
772 17.75 wind 1.0 270 > th dose independent rect. 11 18
776 17.76 precipitation 0.1 270 < th dose independent rect. 1 14
777 17.76 wind 3.0 14400 < th dose dependent rect. 8 1
779 17.76 precipitation 0.1 270 < th dose dependent rect. 1 14
784 17.77 atmosphere 1000.0 270 > th dose independent rect. 4 23
803 17.80 wind 7.0 270 < th dose independent rect. 15 10
809 17.81 radiation 20.0 4320 < th dose independent sin 13 NA
814 17.81 temperature 15.0 270 > th dose independent rect. 11 18
823 17.82 wind 1.0 14400 < th dose independent rect. 22 4
831 17.82 atmosphere 995.0 10 > th dose dependent rect. 18 10
839 17.83 wind 1.0 14400 < th dose independent rect. 24 2
840 17.83 wind 9.0 90 < th dose independent rect. 3 14
841 17.83 atmosphere 1000.0 270 > th dose independent rect. 5 20
846 17.83 radiation 40.0 90 < th dose dependent rect. 17 10
899 17.89 radiation 40.0 270 < th dose independent rect. 15 10
908 17.90 radiation 20.0 1440 > th dose independent rect. 11 2
923 17.91 temperature 30.0 4320 > th dose dependent rect. 14 5
948 17.92 atmosphere 1000.0 270 > th dose dependent rect. 23 7
959 17.93 radiation 30.0 4320 > th dose independent rect. 14 18
976 17.94 precipitation 0.1 90 < th dose independent rect. 17 10
984 17.94 precipitation 0.1 90 < th dose dependent rect. 17 10
988 17.95 humidity 80.0 43200 < th dose independent rect. 19 2
991 17.95 temperature 10.0 270 > th dose independent rect. 15 10
993 17.95 temperature 10.0 270 > th dose independent rect. 1 14
994 17.95 atmosphere 1015.0 270 < th dose independent rect. 1 14
995 17.95 radiation 20.0 1440 < th dose independent rect. 23 16