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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0207900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Alpha/beta hydrolase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.9 (0.0368) R2 : 0.833
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.12 (0.0982) R2dC : 0.393 R2C : 0.526
β3 : 3.13 (0.113) R2dE : 0.298 R2E : 0.437
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.354 (0.0773) R2dN8 : 0.00906 R2N8 : 0.00207
σ : 0.69
deviance : 219.53
__
_____
C
peak time of C : 17.4
E
wheather : temperature
threshold : 42.8
memory length : 71
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 6.03
open length of G : 11.5

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
201.94 0.668 5.85 0.602 3.42 3.01 3.1 -1.73 0.509 16.7 35.27 83 6.08 11.4
200.82 0.66 5.87 0.499 3.2 3.26 2.4 -- 0.479 17.2 38.98 75 6.02 11.5
218.12 0.688 5.85 0.544 3.33 3 -- -0.731 0.489 16.8 37.88 56 6.22 11.4
215.37 0.684 5.9 0.428 3.17 3.25 -- -- 0.383 17.4 41.62 69 6.05 11.5
319.32 0.832 6.01 0.503 -- 4.01 -- 0.327 0.2 -- 80.23 372 6.47 11.9
301.58 0.814 5.87 0.0417 4.22 -- 1 -- 0.346 15.4 -- -- -- --
304.71 0.817 5.86 0.0603 4.22 -- -- -- 0.352 15.4 -- -- -- --
281.06 0.781 5.81 0.425 -- 4.68 -- -- 0.43 -- 70.59 443 5.7 12.6
219.53 0.69 5.9 -- 3.12 3.13 -- -- 0.354 17.4 42.8 71 6.03 11.5
1309.21 1.69 5.86 -0.118 -- -- -- -- 0.241 -- -- -- -- --
304.81 0.817 5.86 -- 4.22 -- -- -- 0.345 15.4 -- -- -- --
278.31 0.777 5.82 -- -- 4.7 -- -- 0.431 -- 73.6 467 5.63 12
1309.58 1.69 5.86 -- -- -- -- -- 0.254 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 221.56 temperature 30.0 90 < th dose dependent rect. 6 11
2 223.15 temperature 30.0 720 < th dose dependent rect. 6 1
13 231.70 temperature 10.0 720 > th dose dependent rect. 9 5
19 232.59 wind 7.0 90 < th dose dependent rect. 3 3
25 233.17 wind 5.0 10 < th dose independent rect. 4 2
28 233.42 wind 3.0 90 < th dose independent rect. 3 3
29 233.88 wind 9.0 10 < th dose dependent rect. 4 2
30 233.98 precipitation 0.1 10 < th dose independent rect. 4 2
31 233.98 precipitation 0.1 10 < th dose dependent rect. 4 2
33 234.07 temperature 10.0 270 > th dose dependent rect. 9 12
34 234.13 atmosphere 1010.0 10 < th dose independent rect. 4 3
40 234.33 temperature 10.0 10 > th dose independent rect. 4 2
42 234.33 temperature 30.0 10 < th dose independent rect. 4 2
43 234.33 humidity 50.0 10 > th dose independent rect. 4 2
46 234.33 atmosphere 995.0 10 > th dose independent rect. 4 2
49 234.33 radiation 20.0 10 < th dose independent rect. 4 2
52 234.33 temperature 10.0 10 > th dose independent rect. 6 22
54 235.08 wind 5.0 90 < th dose independent rect. 17 13
55 235.20 precipitation 0.1 90 < th dose independent rect. 3 3
56 235.20 precipitation 0.1 90 < th dose dependent rect. 3 3
58 235.26 temperature 15.0 720 > th dose independent rect. 18 11
59 235.40 humidity 50.0 10 > th dose dependent rect. 4 2
61 235.61 temperature 15.0 720 > th dose independent rect. 17 13
74 236.27 atmosphere 1015.0 10 < th dose dependent rect. 4 2
77 236.52 temperature 10.0 90 > th dose independent rect. 3 3
79 236.52 temperature 30.0 90 < th dose independent rect. 3 3
80 236.52 humidity 50.0 90 > th dose independent rect. 3 3
83 236.52 atmosphere 995.0 90 > th dose independent rect. 3 3
84 236.52 atmosphere 1010.0 90 < th dose independent rect. 3 3
86 236.52 radiation 20.0 90 < th dose independent rect. 3 3
89 236.52 temperature 10.0 90 > th dose independent rect. 6 21
97 236.70 humidity 50.0 10 > th dose dependent rect. 6 22
112 236.78 temperature 15.0 720 > th dose independent rect. 18 19
114 236.93 temperature 30.0 10 < th dose dependent rect. 6 22
118 237.10 humidity 50.0 90 > th dose dependent rect. 3 3
121 237.20 radiation 40.0 10 < th dose dependent rect. 4 2
123 237.31 wind 9.0 10 < th dose independent rect. 6 22
128 237.56 radiation 40.0 90 < th dose dependent rect. 3 3
130 237.67 radiation 1.0 720 > th dose independent rect. 8 7
134 237.84 atmosphere 1015.0 10 < th dose independent rect. 6 22
136 237.92 wind 1.0 90 > th dose independent rect. 6 11
138 237.99 temperature 10.0 10 > th dose dependent rect. 4 2
140 238.08 wind 9.0 90 < th dose dependent rect. 17 13
141 238.10 temperature 30.0 90 < th dose independent rect. 6 11
143 238.22 temperature 15.0 90 > th dose independent rect. 17 13
146 238.48 temperature 30.0 10 < th dose dependent rect. 4 2
149 238.65 wind 9.0 90 < th dose independent rect. 6 21
160 239.07 precipitation 0.1 10 < th dose independent rect. 6 22
161 239.07 precipitation 0.1 10 < th dose dependent rect. 6 22
162 239.11 precipitation 0.1 90 < th dose independent rect. 17 13
164 239.11 precipitation 0.1 90 < th dose dependent rect. 17 13
167 239.18 temperature 10.0 90 > th dose dependent rect. 3 3
168 239.19 temperature 15.0 720 > th dose independent rect. 1 5
174 239.51 temperature 10.0 90 > th dose independent rect. 6 11
175 239.51 atmosphere 1015.0 90 < th dose independent rect. 6 11
177 239.51 radiation 20.0 90 < th dose independent rect. 17 13
181 239.61 atmosphere 995.0 30 > th dose dependent rect. 6 12
186 239.83 atmosphere 995.0 90 > th dose independent rect. 17 13
192 240.07 atmosphere 1015.0 90 < th dose independent rect. 6 21
198 240.24 atmosphere 995.0 10 > th dose independent rect. 6 22
204 240.39 precipitation 0.1 720 < th dose independent rect. 7 23
205 240.39 precipitation 0.1 720 < th dose dependent rect. 7 23
214 240.84 humidity 50.0 90 > th dose independent rect. 6 11
220 241.03 precipitation 0.1 90 < th dose independent rect. 6 11
221 241.03 precipitation 0.1 90 < th dose dependent rect. 6 11
222 241.08 atmosphere 995.0 90 > th dose independent rect. 6 11
224 241.16 temperature 15.0 720 > th dose independent rect. 18 1
231 241.39 atmosphere 995.0 10 > th dose dependent rect. 4 2
235 241.55 radiation 40.0 90 < th dose independent rect. 6 21
238 241.64 radiation 40.0 90 < th dose dependent rect. 17 13
267 242.44 humidity 50.0 90 > th dose independent rect. 17 13
292 242.69 wind 1.0 720 > th dose independent rect. 18 1
297 242.79 precipitation 0.1 720 < th dose independent rect. 18 1
298 242.79 precipitation 0.1 720 < th dose dependent rect. 18 1
300 242.82 radiation 40.0 90 < th dose dependent rect. 6 21
305 242.93 humidity 90.0 720 < th dose independent rect. 9 5
329 243.46 temperature 25.0 90 < th dose independent rect. 6 21
335 243.60 wind 5.0 720 < th dose independent rect. 6 1
337 243.62 atmosphere 995.0 720 > th dose dependent rect. 6 1
341 243.71 atmosphere 1015.0 720 < th dose independent rect. 1 5
345 243.83 temperature 25.0 720 < th dose independent rect. 6 1
348 243.93 humidity 50.0 720 > th dose independent rect. 18 1
349 243.93 atmosphere 1015.0 720 < th dose independent rect. 18 1
350 243.93 radiation 20.0 720 < th dose independent rect. 18 1
353 243.93 temperature 15.0 270 > th dose independent rect. 1 12
354 243.93 temperature 10.0 720 > th dose independent rect. 19 23
359 244.08 wind 9.0 720 < th dose independent rect. 18 1
368 244.31 wind 9.0 90 < th dose independent rect. 6 11
373 244.39 wind 9.0 270 < th dose dependent rect. 1 12
381 244.50 radiation 40.0 10 < th dose dependent rect. 6 22
407 244.58 wind 9.0 90 < th dose dependent rect. 3 12
408 244.68 atmosphere 1015.0 1440 < th dose independent rect. 3 4
409 244.68 temperature 15.0 10 > th dose dependent rect. 4 19
411 244.74 temperature 15.0 720 > th dose independent rect. 8 7
418 244.89 humidity 50.0 10 > th dose independent rect. 6 22
421 244.90 temperature 10.0 720 > th dose independent rect. 6 1
423 244.90 humidity 50.0 720 > th dose independent rect. 6 1
425 244.90 atmosphere 995.0 720 > th dose independent rect. 6 1
426 244.90 atmosphere 1015.0 720 < th dose independent rect. 6 1
427 244.90 radiation 40.0 720 < th dose independent rect. 6 1
428 244.90 temperature 10.0 720 > th dose independent rect. 7 23
432 244.97 wind 9.0 720 < th dose independent rect. 17 13
449 245.34 radiation 40.0 720 < th dose dependent rect. 18 1
471 245.50 temperature 15.0 270 > th dose independent rect. 9 12
472 245.50 temperature 10.0 90 > th dose dependent rect. 3 20
511 246.17 temperature 25.0 10 < th dose independent rect. 7 21
517 246.30 precipitation 0.1 720 < th dose independent rect. 6 1
518 246.30 precipitation 0.1 720 < th dose dependent rect. 6 1
520 246.34 radiation 40.0 90 < th dose dependent rect. 15 15
522 246.35 humidity 50.0 90 > th dose dependent rect. 6 11
537 246.56 wind 9.0 720 < th dose independent rect. 18 11
539 246.56 atmosphere 1015.0 720 < th dose independent rect. 3 17
542 246.61 precipitation 0.1 720 < th dose independent rect. 17 13
543 246.61 precipitation 0.1 720 < th dose dependent rect. 17 13
547 246.67 precipitation 0.1 720 < th dose independent rect. 18 11
548 246.67 precipitation 0.1 720 < th dose dependent rect. 18 11
553 246.75 radiation 40.0 90 < th dose dependent rect. 13 14
560 246.88 temperature 10.0 720 > th dose independent rect. 6 11
561 246.88 atmosphere 1015.0 720 < th dose independent rect. 6 11
563 246.88 radiation 30.0 720 < th dose independent rect. 17 13
567 246.90 radiation 30.0 1440 < th dose independent rect. 4 3
571 246.92 wind 9.0 1440 < th dose independent rect. 4 3
572 246.92 temperature 10.0 1440 > th dose independent rect. 4 3
575 246.92 temperature 30.0 1440 < th dose independent rect. 4 3
579 246.92 humidity 50.0 1440 > th dose independent rect. 4 3
584 246.92 atmosphere 995.0 1440 > th dose independent rect. 4 3
590 246.92 temperature 10.0 1440 > th dose independent rect. 7 21
610 247.29 humidity 50.0 720 > th dose independent rect. 18 11
611 247.29 radiation 20.0 720 < th dose independent rect. 18 11
615 247.29 temperature 10.0 720 > th dose independent rect. 5 13
616 247.29 atmosphere 1015.0 720 < th dose independent rect. 5 13
623 247.34 atmosphere 995.0 720 > th dose independent rect. 18 1
625 247.40 temperature 15.0 720 > th dose independent rect. 23 7
663 247.90 humidity 50.0 720 > th dose dependent rect. 6 1
666 247.94 temperature 10.0 720 > th dose dependent rect. 3 2
673 248.01 radiation 40.0 720 < th dose dependent rect. 18 11
707 248.32 humidity 50.0 90 > th dose dependent rect. 6 9
720 248.45 radiation 40.0 90 < th dose dependent rect. 15 12
741 248.77 temperature 15.0 720 > th dose independent rect. 1 14
744 248.80 atmosphere 1010.0 10 < th dose independent rect. 18 13
753 248.91 atmosphere 995.0 720 > th dose independent rect. 18 11
766 248.99 temperature 30.0 1440 < th dose independent rect. 19 12
790 249.12 wind 7.0 270 < th dose independent rect. 1 12
793 249.14 radiation 40.0 720 < th dose dependent rect. 6 1
795 249.15 temperature 15.0 720 > th dose independent rect. 5 22
827 249.52 temperature 30.0 30 < th dose independent rect. 18 12
842 249.74 temperature 10.0 720 > th dose dependent rect. 2 18
845 249.79 temperature 10.0 720 > th dose dependent rect. 18 1
862 249.98 temperature 30.0 720 < th dose dependent rect. 22 18
868 250.03 temperature 30.0 720 < th dose dependent sin 4 NA
902 250.32 wind 3.0 90 < th dose dependent rect. 3 8
920 250.51 temperature 15.0 720 > th dose independent rect. 23 15
944 250.67 temperature 30.0 720 < th dose independent rect. 6 3
970 250.91 atmosphere 1010.0 10 < th dose independent rect. 4 19
974 250.98 temperature 15.0 90 > th dose independent rect. 3 12
979 251.00 radiation 10.0 90 < th dose dependent rect. 3 6
993 251.12 radiation 40.0 270 < th dose independent rect. 13 12