Os02g0205500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Fatty acid elongase 1.
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Os02g0205500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Fatty acid elongase 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 389.48 | 0.927 | 10.2 | 2.72 | 1.47 | -0.327 | -0.305 | -6.36 | 0.604 | 14.6 | 33.1 | 1146 | -- | -- |
| 393.18 | 0.924 | 10.1 | 3.57 | 1.38 | -1.01 | 0.36 | -- | 0.597 | 14.6 | 34.1 | 1237 | -- | -- |
| 389.8 | 0.92 | 10.2 | 2.73 | 1.47 | -0.335 | -- | -6.24 | 0.604 | 14.6 | 33.14 | 1148 | -- | -- |
| 390.3 | 0.92 | 10.2 | 3.66 | 1.45 | -1.24 | -- | -- | 0.589 | 14.5 | 34.36 | 1227 | -- | -- |
| 513.62 | 1.06 | 10.2 | 2.86 | -- | -0.68 | -- | -5.15 | 0.537 | -- | 33.1 | 1144 | -- | -- |
| 442.59 | 0.986 | 10.1 | 3.39 | 1.62 | -- | 0.0109 | -- | 0.777 | 14.5 | -- | -- | -- | -- |
| 442.59 | 0.985 | 10.1 | 3.39 | 1.62 | -- | -- | -- | 0.777 | 14.5 | -- | -- | -- | -- |
| 515.78 | 1.06 | 10.1 | 3.64 | -- | -1.29 | -- | -- | 0.543 | -- | 33.3 | 1146 | -- | -- |
| 726.3 | 1.26 | 10.2 | -- | 1.47 | -0.793 | -- | -- | 0.291 | 14.6 | 34.39 | 967 | -- | -- |
| 597.38 | 1.14 | 10.1 | 3.32 | -- | -- | -- | -- | 0.737 | -- | -- | -- | -- | -- |
| 745.78 | 1.28 | 10.2 | -- | 1.56 | -- | -- | -- | 0.4 | 14.4 | -- | -- | -- | -- |
| 850.91 | 1.36 | 10.2 | -- | -- | -0.934 | -- | -- | 0.227 | -- | 33.6 | 1041 | -- | -- |
| 888.65 | 1.39 | 10.2 | -- | -- | -- | -- | -- | 0.369 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 386.69 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 3 |
| 13 | 387.74 | humidity | 70 | 1440 | < th | dose dependent | rect. | 15 | 2 |
| 16 | 388.83 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 7 |
| 19 | 389.62 | humidity | 60 | 1440 | > th | dose independent | rect. | 14 | 3 |
| 22 | 390.58 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 28 | 391.26 | humidity | 60 | 1440 | < th | dose independent | rect. | 14 | 3 |
| 54 | 392.25 | humidity | 60 | 1440 | > th | dose independent | rect. | 14 | 15 |
| 58 | 392.27 | humidity | 60 | 1440 | > th | dose independent | rect. | 14 | 17 |
| 61 | 392.30 | humidity | 60 | 1440 | > th | dose independent | rect. | 14 | 11 |
| 80 | 392.75 | wind | 7 | 270 | < th | dose independent | rect. | 15 | 14 |
| 81 | 392.75 | wind | 7 | 720 | < th | dose independent | rect. | 7 | 23 |
| 98 | 392.86 | humidity | 70 | 1440 | < th | dose dependent | rect. | 14 | 18 |
| 101 | 392.91 | wind | 7 | 720 | < th | dose independent | rect. | 8 | 21 |
| 102 | 392.91 | wind | 7 | 90 | > th | dose dependent | sin | 11 | NA |
| 178 | 393.71 | temperature | 30 | 1440 | > th | dose dependent | sin | 13 | NA |
| 228 | 394.00 | wind | 7 | 720 | < th | dose independent | rect. | 8 | 14 |
| 229 | 394.04 | temperature | 30 | 720 | > th | dose independent | rect. | 17 | 2 |
| 308 | 394.84 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 316 | 394.93 | humidity | 70 | 1440 | < th | dose dependent | sin | 14 | NA |
| 357 | 395.13 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 15 |
| 393 | 395.28 | wind | 7 | 90 | < th | dose independent | sin | 11 | NA |
| 435 | 395.39 | wind | 7 | 90 | > th | dose independent | sin | 11 | NA |
| 436 | 395.39 | humidity | 60 | 1440 | > th | dose independent | sin | 14 | NA |
| 437 | 395.39 | wind | 7 | 720 | < th | dose independent | rect. | 10 | 10 |
| 440 | 395.42 | wind | 7 | 720 | < th | dose independent | rect. | 8 | 12 |
| 444 | 395.47 | wind | 7 | 720 | < th | dose independent | rect. | 13 | 7 |
| 445 | 395.47 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 5 |
| 455 | 395.57 | wind | 7 | 720 | < th | dose independent | rect. | 8 | 17 |
| 470 | 395.59 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 472 | 395.61 | wind | 7 | 720 | < th | dose independent | rect. | 21 | 23 |
| 478 | 395.67 | wind | 7 | 270 | < th | dose independent | rect. | 24 | 22 |
| 485 | 395.79 | humidity | 70 | 720 | < th | dose independent | sin | 12 | NA |
| 489 | 395.83 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 8 |
| 535 | 396.17 | humidity | 70 | 720 | < th | dose dependent | rect. | 17 | 3 |
| 589 | 396.44 | humidity | 60 | 1440 | < th | dose independent | sin | 14 | NA |
| 614 | 396.58 | wind | 5 | 720 | > th | dose dependent | rect. | 11 | 14 |
| 659 | 396.77 | wind | 7 | 720 | < th | dose independent | rect. | 13 | 16 |
| 667 | 396.81 | wind | 7 | 720 | > th | dose independent | rect. | 11 | 14 |
| 683 | 396.91 | temperature | 30 | 720 | > th | dose independent | sin | 11 | NA |
| 720 | 397.01 | wind | 7 | 720 | > th | dose dependent | rect. | 15 | 1 |
| 721 | 397.02 | wind | 7 | 720 | < th | dose independent | rect. | 13 | 23 |
| 739 | 397.20 | wind | 7 | 720 | < th | dose independent | rect. | 10 | 18 |
| 757 | 397.23 | wind | 7 | 90 | > th | dose independent | rect. | 17 | 12 |
| 771 | 397.27 | wind | 7 | 720 | > th | dose independent | rect. | 11 | 12 |
| 825 | 397.43 | wind | 7 | 720 | < th | dose independent | rect. | 24 | 20 |
| 838 | 397.50 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 2 |
| 840 | 397.51 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 11 |
| 912 | 397.74 | wind | 7 | 720 | > th | dose independent | sin | 18 | NA |