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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0205200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Unidentified precursor.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.43 (0.028) R2 : 0.000846
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0366 (0.0589) R2dN8 : 0.00109 R2N8 : 0.000846
σ : 0.527
deviance : 127.3
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
118.97 0.512 3.39 -0.13 0.202 -0.533 -0.635 -0.976 0.104 5.25 9.1 4639 -- --
119.5 0.509 3.4 -0.0919 0.195 -0.395 -0.617 -- 0.134 5.05 9 4998 -- --
119.94 0.51 3.39 -0.127 0.203 -0.535 -- -0.782 0.103 5.56 9.104 4638 -- --
120.32 0.511 3.4 -0.0927 0.184 -0.398 -- -- 0.129 4.93 9.04 4998 -- --
121.83 0.514 3.39 -0.139 -- -0.572 -- -0.98 0.122 -- 9.102 4732 -- --
123.19 0.52 3.42 0.0425 0.239 -- -0.645 -- 0.0332 4.69 -- -- -- --
124.26 0.522 3.42 0.0462 0.237 -- -- -- 0.0366 4.98 -- -- -- --
122.07 0.515 3.4 -0.0969 -- -0.444 -- -- 0.14 -- 9.2 4998 -- --
120.45 0.511 3.4 -- 0.188 -0.379 -- -- 0.13 4.93 9.107 4998 -- --
127.22 0.527 3.42 0.0549 -- -- -- -- 0.0427 -- -- -- -- --
124.32 0.522 3.42 -- 0.238 -- -- -- 0.0315 4.97 -- -- -- --
122.28 0.515 3.4 -- -- -0.431 -- -- 0.135 -- 9.2 4998 -- --
127.3 0.527 3.43 -- -- -- -- -- 0.0366 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 113.86 temperature 25.0 270 > th dose independent rect. 1 1
2 114.05 temperature 25.0 90 > th dose dependent rect. 1 4
3 114.15 temperature 25.0 90 > th dose dependent rect. 2 2
10 114.46 atmosphere 1005.0 10 > th dose dependent rect. 2 3
17 115.08 temperature 15.0 30 > th dose independent rect. 3 23
29 116.00 wind 1.0 30 < th dose independent rect. 2 1
30 116.02 atmosphere 1015.0 30 < th dose dependent rect. 2 1
32 116.04 atmosphere 1005.0 30 > th dose dependent rect. 2 1
33 116.05 wind 3.0 30 < th dose dependent rect. 2 1
42 116.09 temperature 25.0 30 < th dose independent rect. 2 1
47 116.11 temperature 10.0 30 > th dose independent rect. 2 1
50 116.11 humidity 50.0 30 > th dose independent rect. 2 1
53 116.11 atmosphere 995.0 30 > th dose independent rect. 2 1
54 116.11 atmosphere 1010.0 30 < th dose independent rect. 2 1
56 116.11 radiation 1.0 30 < th dose independent rect. 2 1
61 116.11 precipitation 0.1 30 < th dose independent rect. 2 1
63 116.11 temperature 10.0 30 > th dose dependent rect. 2 1
65 116.11 radiation 1.0 30 < th dose dependent rect. 2 1
70 116.11 precipitation 0.1 30 < th dose dependent rect. 2 1
72 116.12 humidity 50.0 30 > th dose dependent rect. 2 1
74 116.14 atmosphere 1000.0 30 > th dose independent rect. 3 23
75 116.14 temperature 30.0 30 < th dose dependent rect. 2 1
85 116.23 atmosphere 1005.0 30 > th dose independent rect. 2 1
86 116.23 wind 9.0 30 < th dose independent rect. 3 23
95 116.35 atmosphere 1005.0 270 > th dose dependent rect. 1 2
101 116.41 wind 1.0 30 > th dose independent rect. 2 1
170 117.39 humidity 80.0 14400 < th dose dependent rect. 3 6
171 117.40 radiation 1.0 43200 < th dose dependent rect. 3 1
174 117.42 precipitation 0.1 30 < th dose independent rect. 3 23
175 117.42 precipitation 0.1 30 < th dose dependent rect. 3 23
176 117.43 humidity 90.0 1440 < th dose independent rect. 1 4
186 117.68 temperature 25.0 720 > th dose dependent rect. 5 3
192 117.76 humidity 70.0 14400 > th dose independent rect. 8 1
207 117.95 humidity 70.0 14400 < th dose independent rect. 8 1
215 118.06 humidity 50.0 4320 > th dose independent rect. 14 1
223 118.12 humidity 90.0 1440 > th dose independent rect. 2 1
229 118.14 wind 9.0 1440 < th dose independent rect. 3 1
230 118.14 temperature 10.0 1440 > th dose independent rect. 3 1
233 118.14 temperature 30.0 1440 < th dose independent rect. 3 1
237 118.14 humidity 50.0 1440 > th dose independent rect. 3 1
246 118.14 atmosphere 995.0 1440 > th dose independent rect. 3 1
247 118.14 radiation 1.0 1440 < th dose independent rect. 3 1
267 118.14 humidity 70.0 14400 > th dose independent rect. 4 5
268 118.14 temperature 10.0 1440 > th dose independent rect. 4 23
283 118.15 humidity 70.0 14400 > th dose independent rect. 1 8
295 118.17 wind 1.0 14400 < th dose dependent rect. 6 1
296 118.19 temperature 10.0 30 > th dose dependent rect. 3 23
303 118.32 humidity 90.0 1440 > th dose independent rect. 2 3
311 118.40 humidity 50.0 720 > th dose independent rect. 23 16
313 118.42 temperature 25.0 720 > th dose independent rect. 5 4
315 118.43 temperature 25.0 1440 < th dose independent rect. 1 1
329 118.44 temperature 25.0 720 < th dose independent rect. 21 5
333 118.45 humidity 50.0 30 > th dose independent rect. 3 23
346 118.58 wind 1.0 14400 < th dose independent rect. 6 1
350 118.62 humidity 90.0 10 < th dose independent rect. 3 2
357 118.66 temperature 25.0 30 > th dose dependent rect. 16 19
361 118.72 wind 5.0 14400 < th dose dependent rect. 11 1
373 118.79 wind 3.0 14400 > th dose independent rect. 10 1
384 118.85 humidity 80.0 4320 < th dose dependent rect. 1 1
387 118.86 atmosphere 1005.0 30 > th dose independent rect. 2 3
388 118.86 temperature 10.0 30 > th dose dependent rect. 5 21
405 118.94 wind 3.0 14400 < th dose independent rect. 10 1
412 118.98 temperature 25.0 30 > th dose dependent rect. 14 21
413 118.99 humidity 90.0 90 < th dose independent rect. 2 3
416 119.01 temperature 25.0 720 > th dose independent rect. 8 1
423 119.03 humidity 90.0 10 < th dose dependent rect. 4 1
426 119.04 humidity 50.0 4320 < th dose independent rect. 14 1
428 119.04 temperature 15.0 30 > th dose independent rect. 5 21
429 119.04 temperature 25.0 30 > th dose dependent rect. 24 11
435 119.06 temperature 25.0 30 > th dose dependent rect. 6 5
477 119.18 wind 1.0 14400 > th dose independent rect. 5 2
514 119.24 wind 9.0 4320 > th dose independent sin 5 NA
526 119.28 wind 1.0 30 < th dose independent rect. 23 4
534 119.29 temperature 25.0 30 > th dose dependent rect. 22 13
556 119.34 humidity 50.0 1440 > th dose independent rect. 17 17
563 119.36 wind 9.0 4320 < th dose independent sin 5 NA
565 119.36 wind 1.0 14400 < th dose independent rect. 4 4
582 119.39 humidity 70.0 720 < th dose dependent rect. 18 14
584 119.40 atmosphere 1015.0 4320 > th dose dependent rect. 11 1
598 119.44 wind 9.0 4320 > th dose dependent sin 5 NA
600 119.45 precipitation 0.1 14400 < th dose independent rect. 2 1
603 119.45 precipitation 0.1 14400 < th dose dependent rect. 2 1
610 119.46 humidity 50.0 1440 < th dose dependent rect. 17 18
620 119.48 wind 9.0 4320 > th dose independent rect. 4 9
627 119.48 wind 9.0 4320 > th dose independent rect. 21 17
648 119.51 wind 1.0 14400 > th dose independent rect. 4 4
649 119.51 temperature 15.0 720 > th dose independent rect. 19 8
652 119.52 humidity 50.0 1440 < th dose independent rect. 16 19
653 119.52 humidity 80.0 720 > th dose dependent rect. 3 1
655 119.53 humidity 50.0 1440 > th dose independent rect. 17 2
676 119.56 humidity 60.0 720 < th dose independent rect. 18 1
682 119.56 wind 9.0 4320 > th dose independent rect. 21 19
684 119.56 humidity 60.0 720 < th dose dependent rect. 18 1
694 119.57 humidity 50.0 1440 > th dose independent rect. 17 7
699 119.57 wind 9.0 4320 < th dose independent rect. 3 11
705 119.57 humidity 50.0 1440 < th dose independent rect. 17 17
724 119.58 humidity 50.0 720 > th dose independent rect. 7 8
725 119.58 humidity 50.0 1440 > th dose independent rect. 17 11
727 119.58 wind 9.0 4320 < th dose independent rect. 24 14
728 119.58 wind 9.0 4320 < th dose independent rect. 21 17
729 119.58 atmosphere 1000.0 30 > th dose independent rect. 11 23
746 119.60 temperature 25.0 720 > th dose dependent rect. 20 2
750 119.60 temperature 25.0 720 > th dose dependent rect. 19 5
768 119.62 wind 7.0 720 < th dose independent rect. 17 12
774 119.63 wind 3.0 14400 > th dose independent rect. 19 1
837 119.65 precipitation 0.1 14400 > th dose independent rect. 2 1
845 119.65 humidity 50.0 1440 > th dose independent rect. 17 14
847 119.65 wind 1.0 14400 < th dose dependent rect. 2 6
852 119.66 wind 9.0 4320 < th dose independent rect. 21 19
853 119.66 atmosphere 1000.0 30 > th dose independent rect. 5 21
860 119.67 temperature 15.0 1440 > th dose independent rect. 11 1
861 119.67 humidity 80.0 14400 > th dose independent rect. 12 1
862 119.67 humidity 50.0 720 > th dose independent rect. 14 1
868 119.67 wind 9.0 4320 < th dose independent rect. 5 7
878 119.67 atmosphere 1015.0 4320 > th dose dependent rect. 10 3
880 119.67 wind 7.0 4320 > th dose dependent rect. 1 13
890 119.68 humidity 60.0 14400 < th dose dependent rect. 12 1
907 119.70 wind 5.0 14400 < th dose independent rect. 9 8
910 119.70 atmosphere 995.0 720 > th dose independent rect. 23 16
916 119.71 wind 5.0 14400 < th dose independent rect. 10 6
953 119.74 wind 9.0 720 < th dose independent rect. 15 8
958 119.74 wind 1.0 14400 > th dose dependent rect. 11 1
977 119.76 wind 1.0 30 < th dose independent rect. 13 14
982 119.76 wind 9.0 4320 > th dose dependent rect. 4 9
984 119.76 wind 9.0 30 < th dose dependent rect. 3 23
991 119.77 precipitation 0.1 720 < th dose independent rect. 15 8
994 119.77 wind 7.0 720 < th dose independent rect. 15 14
997 119.77 wind 5.0 30 < th dose dependent rect. 2 3
998 119.77 precipitation 0.1 720 < th dose dependent rect. 15 8