Os02g0202300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0202300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.75 | 0.412 | 7.52 | 2.04 | 0.747 | -0.772 | -0.489 | 1.53 | -0.109 | 15.5 | 24.8 | 4301 | -- | -- |
| 77.47 | 0.41 | 7.57 | 1.68 | 0.788 | -0.627 | -0.587 | -- | -0.193 | 15.5 | 25.39 | 4522 | -- | -- |
| 77.48 | 0.41 | 7.51 | 2.05 | 0.743 | -0.774 | -- | 1.61 | -0.104 | 15.6 | 24.69 | 4282 | -- | -- |
| 78.16 | 0.412 | 7.57 | 1.65 | 0.771 | -0.621 | -- | -- | -0.209 | 15.5 | 25.3 | 4548 | -- | -- |
| 106.63 | 0.481 | 7.5 | 2.12 | -- | -0.918 | -- | 1.81 | -0.0803 | -- | 24.16 | 4056 | -- | -- |
| 89.25 | 0.443 | 7.57 | 1.45 | 0.787 | -- | -0.453 | -- | -0.227 | 15.4 | -- | -- | -- | -- |
| 89.89 | 0.444 | 7.57 | 1.44 | 0.785 | -- | -- | -- | -0.229 | 15.4 | -- | -- | -- | -- |
| 107.64 | 0.483 | 7.55 | 1.64 | -- | -0.668 | -- | -- | -0.151 | -- | 23.9 | 2628 | -- | -- |
| 142.24 | 0.555 | 7.62 | -- | 0.741 | -0.245 | -- | -- | -0.43 | 15.5 | 29 | 4642 | -- | -- |
| 124.49 | 0.521 | 7.57 | 1.41 | -- | -- | -- | -- | -0.25 | -- | -- | -- | -- | -- |
| 144.62 | 0.563 | 7.61 | -- | 0.757 | -- | -- | -- | -0.39 | 15.4 | -- | -- | -- | -- |
| 170.11 | 0.609 | 7.62 | -- | -- | 0.508 | -- | -- | -0.456 | -- | 23.9 | 2628 | -- | -- |
| 176.77 | 0.621 | 7.61 | -- | -- | -- | -- | -- | -0.406 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 74.97 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 2 | 74.99 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 6 | 75.17 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 7 | 75.41 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 3 | 7 |
| 8 | 75.47 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 9 | 75.47 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 23 | 75.90 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 3 | 7 |
| 25 | 75.93 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 21 | 7 |
| 28 | 75.97 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 32 | 76.06 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 20 | 16 |
| 34 | 76.08 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 1 | 11 |
| 37 | 76.09 | humidity | 90.0 | 43200 | < th | dose independent | sin | 5 | NA |
| 40 | 76.09 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 4 | 7 |
| 73 | 76.21 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 93 | 76.28 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 107 | 76.32 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 3 | 9 |
| 108 | 76.32 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 5 | 21 |
| 126 | 76.39 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 16 |
| 129 | 76.40 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 140 | 76.43 | humidity | 90.0 | 43200 | > th | dose independent | sin | 5 | NA |
| 149 | 76.44 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 9 |
| 153 | 76.45 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 161 | 76.46 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 16 |
| 166 | 76.46 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 170 | 76.47 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 187 | 76.48 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 19 |
| 198 | 76.50 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 224 | 76.54 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 17 |
| 230 | 76.55 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 237 | 76.55 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 19 |
| 240 | 76.55 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 23 | 17 |
| 244 | 76.56 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 15 | 17 |
| 250 | 76.56 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 11 | 3 |
| 265 | 76.58 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 3 | 23 |
| 274 | 76.59 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 1 | 23 |
| 291 | 76.61 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 314 | 76.63 | humidity | 90.0 | 43200 | < th | dose independent | no | NA | NA |
| 328 | 76.63 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 329 | 76.63 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 337 | 76.64 | humidity | 80.0 | 43200 | > th | dose dependent | sin | 3 | NA |
| 372 | 76.67 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 9 | 23 |
| 378 | 76.67 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 11 | 21 |
| 392 | 76.68 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 393 | 76.68 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 11 | 17 |
| 422 | 76.70 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 14 |
| 433 | 76.71 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 458 | 76.72 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 13 | 19 |
| 470 | 76.73 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 474 | 76.73 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 13 | 15 |
| 496 | 76.74 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 6 | 11 |
| 505 | 76.74 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 13 | 23 |
| 519 | 76.75 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 7 | 9 |
| 530 | 76.75 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 7 | 21 |
| 540 | 76.76 | temperature | 25.0 | 4320 | > th | dose dependent | no | NA | NA |
| 587 | 76.78 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 23 | NA |
| 613 | 76.79 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 21 | NA |
| 623 | 76.79 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 16 | 21 |
| 625 | 76.80 | radiation | 1.0 | 4320 | > th | dose independent | sin | 11 | NA |
| 708 | 76.84 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 20 | 9 |
| 728 | 76.85 | radiation | 1.0 | 4320 | < th | dose independent | sin | 11 | NA |
| 772 | 76.87 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 774 | 76.87 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 7 |
| 776 | 76.87 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 812 | 76.89 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 833 | 76.90 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 1 | 22 |
| 838 | 76.90 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 1 | 22 |
| 889 | 76.94 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 895 | 76.94 | humidity | 80.0 | 43200 | > th | dose dependent | no | NA | NA |
| 896 | 76.94 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 5 |
| 912 | 76.96 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 11 | 23 |
| 931 | 76.98 | radiation | 30.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 969 | 77.01 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 976 | 77.01 | humidity | 80.0 | 43200 | > th | dose dependent | sin | 18 | NA |
| 983 | 77.02 | humidity | 90.0 | 43200 | > th | dose independent | no | NA | NA |
| 997 | 77.02 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 16 | 15 |
| 999 | 77.03 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 15 | 12 |