Os02g0201500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : EF-Hand type domain containing protein.
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Os02g0201500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : EF-Hand type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 111.69 | 0.497 | 6.91 | -0.926 | 0.359 | 0.749 | -0.0089 | -2.71 | -0.455 | 4.47 | 1.766 | 49 | -- | -- |
| 122.08 | 0.515 | 6.92 | -0.969 | 0.438 | 1.04 | 1.39 | -- | -0.463 | 2.19 | -35.5 | 49 | -- | -- |
| 111.69 | 0.492 | 6.91 | -0.926 | 0.358 | 0.747 | -- | -2.71 | -0.455 | 4.5 | 1.9 | 49 | -- | -- |
| 128.2 | 0.527 | 6.91 | -0.993 | 0.404 | 0.902 | -- | -- | -0.455 | 3.91 | 2.299 | 49 | -- | -- |
| 117.69 | 0.505 | 6.9 | -0.886 | -- | 0.635 | -- | -2.82 | -0.419 | -- | 4.29 | 49 | -- | -- |
| 131.64 | 0.538 | 6.9 | -0.954 | 0.355 | -- | -1.35 | -- | -0.435 | 10.2 | -- | -- | -- | -- |
| 137.89 | 0.55 | 6.9 | -1.01 | 0.396 | -- | -- | -- | -0.442 | 8.86 | -- | -- | -- | -- |
| 134.48 | 0.54 | 6.92 | -1 | -- | 0.662 | -- | -- | -0.448 | -- | 7.909 | 47 | -- | -- |
| 154.99 | 0.58 | 6.89 | -- | 0.378 | 0.89 | -- | -- | -0.353 | 4 | 2.57 | 49 | -- | -- |
| 146.83 | 0.566 | 6.91 | -1.01 | -- | -- | -- | -- | -0.439 | -- | -- | -- | -- | -- |
| 164.9 | 0.601 | 6.88 | -- | 0.394 | -- | -- | -- | -0.33 | 9.06 | -- | -- | -- | -- |
| 144.66 | 0.56 | 6.87 | -- | -- | 2.08 | -- | -- | -0.265 | -- | 56.67 | 49 | -- | -- |
| 173.85 | 0.615 | 6.89 | -- | -- | -- | -- | -- | -0.327 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 109.60 | radiation | 1 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 2 | 109.91 | radiation | 20 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 7 | 110.63 | radiation | 10 | 90 | < th | dose independent | rect. | 21 | 23 |
| 9 | 111.03 | radiation | 20 | 90 | < th | dose independent | rect. | 1 | 23 |
| 12 | 111.23 | radiation | 30 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 14 | 111.35 | radiation | 30 | 270 | < th | dose independent | rect. | 10 | 22 |
| 18 | 111.65 | radiation | 10 | 30 | < th | dose independent | rect. | 6 | 14 |
| 19 | 111.69 | radiation | 1 | 90 | > th | dose dependent | rect. | 10 | 23 |
| 25 | 111.94 | radiation | 20 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 33 | 112.10 | radiation | 1 | 10 | > th | dose dependent | rect. | 15 | 21 |
| 34 | 112.14 | radiation | 20 | 30 | < th | dose independent | rect. | 17 | 23 |
| 37 | 112.31 | radiation | 1 | 10 | > th | dose dependent | rect. | 7 | 12 |
| 51 | 112.43 | radiation | 1 | 90 | > th | dose dependent | rect. | 7 | 10 |
| 66 | 112.52 | radiation | 1 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 70 | 112.62 | radiation | 40 | 270 | < th | dose dependent | rect. | 10 | 22 |
| 71 | 112.62 | radiation | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 100 | 112.69 | radiation | 10 | 90 | > th | dose independent | rect. | 9 | 23 |
| 103 | 112.72 | radiation | 10 | 90 | > th | dose independent | sin | 0 | NA |
| 111 | 112.80 | radiation | 1 | 90 | > th | dose dependent | sin | 23 | NA |
| 129 | 112.92 | radiation | 10 | 90 | > th | dose independent | rect. | 13 | 23 |
| 142 | 112.94 | radiation | 1 | 90 | > th | dose dependent | no | NA | NA |
| 206 | 113.03 | radiation | 10 | 90 | < th | dose independent | sin | 22 | NA |
| 208 | 113.06 | radiation | 1 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 214 | 113.12 | radiation | 10 | 90 | > th | dose independent | rect. | 15 | 23 |
| 217 | 113.16 | radiation | 20 | 30 | < th | dose dependent | sin | 22 | NA |
| 222 | 113.19 | radiation | 1 | 10 | > th | dose dependent | sin | 23 | NA |
| 241 | 113.29 | radiation | 20 | 90 | < th | dose independent | no | NA | NA |
| 244 | 113.30 | radiation | 10 | 90 | > th | dose independent | rect. | 6 | 11 |
| 259 | 113.31 | radiation | 20 | 90 | < th | dose independent | rect. | 15 | 23 |
| 265 | 113.36 | radiation | 10 | 90 | > th | dose independent | no | NA | NA |
| 344 | 113.37 | radiation | 1 | 90 | > th | dose dependent | rect. | 9 | 8 |
| 345 | 113.38 | radiation | 1 | 10 | > th | dose dependent | no | NA | NA |
| 444 | 113.43 | radiation | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 461 | 113.47 | radiation | 1 | 10 | > th | dose dependent | rect. | 7 | 5 |
| 496 | 113.55 | radiation | 30 | 90 | < th | dose dependent | no | NA | NA |
| 635 | 113.89 | radiation | 1 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 668 | 114.06 | radiation | 10 | 270 | < th | dose independent | rect. | 2 | 15 |
| 725 | 114.27 | radiation | 40 | 270 | < th | dose independent | rect. | 10 | 10 |
| 760 | 114.32 | radiation | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 771 | 114.45 | radiation | 20 | 10 | < th | dose independent | rect. | 9 | 23 |