Os02g0200900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Leucine-rich repeat, cysteine-containing containing protein.
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Os02g0200900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Leucine-rich repeat, cysteine-containing containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.85 | 0.315 | 15.5 | 0.795 | 0.256 | 0.0447 | 0.197 | 1.77 | 0.553 | 21.2 | 1006 | 6681 | -- | -- |
| 49.81 | 0.329 | 15.4 | 1.12 | 0.255 | -0.276 | 0.32 | -- | 0.631 | 20.7 | 1003 | 22444 | -- | -- |
| 44.98 | 0.312 | 15.5 | 0.785 | 0.255 | 0.0443 | -- | 1.77 | 0.551 | 21.4 | 1006 | 6708 | -- | -- |
| 49.82 | 0.329 | 15.4 | 1.15 | 0.259 | -0.242 | -- | -- | 0.658 | 21.2 | 1001 | 22252 | -- | -- |
| 48.78 | 0.325 | 15.5 | 0.794 | -- | 0.0461 | -- | 1.74 | 0.552 | -- | 1006 | 6686 | -- | -- |
| 51.15 | 0.335 | 15.4 | 1.22 | 0.249 | -- | 0.285 | -- | 0.649 | 20.9 | -- | -- | -- | -- |
| 51.4 | 0.336 | 15.4 | 1.21 | 0.247 | -- | -- | -- | 0.648 | 21.3 | -- | -- | -- | -- |
| 53.27 | 0.34 | 15.4 | 1.14 | -- | -0.243 | -- | -- | 0.657 | -- | 1000 | 22282 | -- | -- |
| 63.56 | 0.371 | 15.5 | -- | 0.246 | -0.977 | -- | -- | 0.352 | 21.2 | 994.8 | 47520 | -- | -- |
| 54.96 | 0.346 | 15.4 | 1.21 | -- | -- | -- | -- | 0.647 | -- | -- | -- | -- | -- |
| 89.86 | 0.443 | 15.4 | -- | 0.248 | -- | -- | -- | 0.514 | 21.6 | -- | -- | -- | -- |
| 67.06 | 0.381 | 15.5 | -- | -- | -0.979 | -- | -- | 0.347 | -- | 994.8 | 47520 | -- | -- |
| 93.51 | 0.451 | 15.4 | -- | -- | -- | -- | -- | 0.513 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.34 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 2 | 42.44 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 7 | 43.06 | wind | 5.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 8 | 43.09 | wind | 5.0 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 9 | 43.09 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 13 | 43.14 | wind | 5.0 | 43200 | < th | dose independent | rect. | 7 | 7 |
| 16 | 43.15 | wind | 5.0 | 43200 | > th | dose independent | rect. | 7 | 7 |
| 20 | 43.16 | wind | 5.0 | 43200 | < th | dose independent | rect. | 8 | 5 |
| 28 | 43.21 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 35 | 43.25 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 7 | 6 |
| 48 | 43.33 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 3 |
| 52 | 43.34 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 70 | 43.43 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 13 | 11 |
| 85 | 43.52 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 88 | 43.52 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 3 | 9 |
| 109 | 43.58 | wind | 5.0 | 43200 | < th | dose independent | sin | 4 | NA |
| 113 | 43.58 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 20 | 8 |
| 122 | 43.60 | wind | 5.0 | 43200 | > th | dose independent | sin | 4 | NA |
| 124 | 43.60 | wind | 5.0 | 43200 | > th | dose independent | rect. | 17 | 20 |
| 125 | 43.60 | humidity | 60.0 | 43200 | > th | dose dependent | sin | 18 | NA |
| 134 | 43.61 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 7 | 5 |
| 150 | 43.64 | wind | 5.0 | 43200 | < th | dose independent | rect. | 17 | 20 |
| 172 | 43.67 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 20 |
| 181 | 43.67 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 17 | 20 |
| 182 | 43.68 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 7 |
| 228 | 43.74 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 235 | 43.75 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 17 |
| 257 | 43.77 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 272 | 43.79 | wind | 1.0 | 43200 | > th | dose independent | rect. | 13 | 11 |
| 287 | 43.80 | wind | 3.0 | 43200 | > th | dose dependent | sin | 5 | NA |
| 300 | 43.81 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 20 | 18 |
| 314 | 43.82 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 21 | 15 |
| 329 | 43.84 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 7 |
| 348 | 43.85 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 9 |
| 364 | 43.86 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 8 |
| 403 | 43.89 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 408 | 43.90 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 8 |
| 442 | 43.92 | wind | 9.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 494 | 43.96 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 8 |
| 528 | 43.99 | wind | 1.0 | 43200 | < th | dose independent | rect. | 13 | 11 |
| 687 | 44.09 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 772 | 44.14 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 783 | 44.15 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 791 | 44.15 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 833 | 44.18 | wind | 5.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 842 | 44.18 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 846 | 44.19 | wind | 5.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 862 | 44.19 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 2 | 21 |
| 865 | 44.20 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 5 |
| 866 | 44.20 | wind | 1.0 | 43200 | > th | dose independent | rect. | 24 | 7 |
| 913 | 44.23 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 919 | 44.23 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 21 | 9 |