Os02g0198700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Subtilisin-like protease.
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Os02g0198700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Subtilisin-like protease.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 193.65 | 0.654 | 8.24 | -0.95 | 0.192 | -2.49 | 3.7 | 5.79 | -0.819 | 2.05 | 19.15 | 1017 | 23.5 | -- |
| 227.04 | 0.702 | 8.32 | -1.61 | 0.242 | -2.98 | 4.15 | -- | -1.08 | 1.8 | -7.412 | 5443 | 22.3 | -- |
| 241.51 | 0.724 | 8.25 | -1.03 | 0.401 | -2.33 | -- | 5.46 | -0.801 | 5.68 | 19.56 | 1054 | 0.409 | -- |
| 266.32 | 0.76 | 8.37 | -1.71 | 0.958 | -2.33 | -- | -- | -1.04 | 5.36 | 14.23 | 8153 | 1.66 | -- |
| 247.13 | 0.732 | 8.26 | -1.14 | -- | -2.63 | -- | 5.23 | -0.828 | -- | 19.1 | 1011 | 23.6 | -- |
| 334.29 | 0.857 | 8.51 | -3 | 0.808 | -- | 3.58 | -- | -1.68 | 3.36 | -- | -- | -- | -- |
| 361.49 | 0.89 | 8.51 | -3.07 | 0.997 | -- | -- | -- | -1.71 | 5.29 | -- | -- | -- | -- |
| 265.16 | 0.758 | 8.41 | -2.1 | -- | -3.1 | -- | -- | -1.1 | -- | 10.87 | 1145 | 0.201 | -- |
| 299.75 | 0.806 | 8.25 | -- | 1.04 | -2.82 | -- | -- | -0.535 | 5.1 | 4.079 | 47520 | 5.77 | -- |
| 413.32 | 0.95 | 8.52 | -3.04 | -- | -- | -- | -- | -1.68 | -- | -- | -- | -- | -- |
| 609.81 | 1.16 | 8.43 | -- | 0.945 | -- | -- | -- | -1.37 | 5.42 | -- | -- | -- | -- |
| 332.96 | 0.85 | 8.28 | -- | -- | -3.15 | -- | -- | -0.492 | -- | 1.361 | 24011 | 23.9 | -- |
| 656.32 | 1.2 | 8.45 | -- | -- | -- | -- | -- | -1.35 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 207.78 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 20 |
| 9 | 210.65 | temperature | 20 | 720 | > th | dose dependent | sin | 4 | NA |
| 25 | 214.98 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 20 |
| 26 | 214.98 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 21 |
| 27 | 215.08 | temperature | 20 | 270 | > th | dose dependent | rect. | 5 | 22 |
| 37 | 215.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 22 |
| 65 | 216.56 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 9 |
| 67 | 216.68 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 9 |
| 117 | 217.77 | temperature | 20 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 119 | 217.85 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 129 | 218.12 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 160 | 218.74 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 169 | 218.86 | temperature | 20 | 4320 | > th | dose independent | sin | 13 | NA |
| 192 | 219.26 | temperature | 20 | 4320 | < th | dose independent | sin | 13 | NA |
| 205 | 219.47 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 224 | 219.62 | temperature | 25 | 4320 | > th | dose independent | rect. | 11 | 2 |
| 227 | 219.70 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 270 | 220.44 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 16 |
| 333 | 221.23 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 345 | 221.37 | temperature | 30 | 720 | < th | dose dependent | sin | 4 | NA |
| 363 | 221.57 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 385 | 221.79 | temperature | 20 | 720 | > th | dose dependent | rect. | 5 | 6 |
| 389 | 221.84 | temperature | 25 | 4320 | < th | dose independent | rect. | 10 | 3 |
| 420 | 222.21 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 447 | 222.51 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 4 |
| 501 | 223.09 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 551 | 223.64 | humidity | 70 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 694 | 224.95 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 696 | 224.96 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 9 |
| 728 | 225.17 | humidity | 70 | 43200 | < th | dose dependent | rect. | 19 | 15 |
| 732 | 225.23 | temperature | 20 | 4320 | > th | dose independent | rect. | 1 | 1 |
| 773 | 225.55 | humidity | 60 | 43200 | < th | dose independent | rect. | 18 | 18 |
| 797 | 225.68 | temperature | 20 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 799 | 225.68 | humidity | 70 | 43200 | > th | dose independent | rect. | 19 | 14 |
| 810 | 225.74 | humidity | 60 | 43200 | > th | dose independent | rect. | 19 | 17 |
| 818 | 225.82 | humidity | 70 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 861 | 226.05 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 933 | 226.47 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 17 |
| 997 | 226.77 | humidity | 70 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 1000 | 226.78 | temperature | 30 | 1440 | < th | dose dependent | rect. | 19 | 5 |