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Os02g0198500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.4 (0.0235) R2 : 0.798
β1 : 1.11 (0.0859) R2dD : 0.0775 R2D : 0.0675
β2 : 1.49 (0.0649) R2dC : 0.274 R2C : 0.465
β3 : 1.19 (0.053) R2dE : 0.257 R2E : 0.454
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.159 (0.0501) R2dN8 : 0.00596 R2N8 : -0.00549
σ : 0.439
deviance : 88.69
__
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C
peak time of C : 19.5
E
wheather : radiation
threshold : 22.36
memory length : 9
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
88.58 0.442 12.4 1.12 1.5 1.18 0.0837 0.106 0.159 19.5 22.37 10 -- --
88.62 0.438 12.4 1.12 1.49 1.18 0.153 -- 0.159 19.5 22.36 9 -- --
88.59 0.438 12.4 1.12 1.5 1.19 -- 0.125 0.158 19.5 22.36 9 -- --
88.69 0.439 12.4 1.11 1.49 1.19 -- -- 0.159 19.5 22.36 9 -- --
188.6 0.64 12.4 1.07 -- 1.59 -- -0.0641 0.136 -- 17.18 8 -- --
113.79 0.5 12.4 1.08 2.24 -- 0.29 -- 0.143 21.5 -- -- -- --
114.1 0.5 12.4 1.07 2.24 -- -- -- 0.143 21.5 -- -- -- --
187.56 0.638 12.4 1.08 -- 1.59 -- -- 0.131 -- 16.78 6 -- --
121.28 0.513 12.4 -- 1.5 1.13 -- -- 0.0303 19.7 21.89 8 -- --
407.57 0.943 12.4 1.09 -- -- -- -- 0.136 -- -- -- -- --
144.47 0.562 12.4 -- 2.24 -- -- -- 0.0234 21.5 -- -- -- --
216.62 0.685 12.4 -- -- 1.56 -- -- 0.0141 -- 15.51 4 -- --
438.78 0.978 12.4 -- -- -- -- -- 0.0154 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 77.15 temperature 10.0 270 > th dose dependent rect. 13 17
11 79.28 temperature 10.0 270 > th dose dependent rect. 13 7
14 79.51 humidity 50.0 270 > th dose independent rect. 7 17
15 79.55 radiation 1.0 270 < th dose dependent rect. 17 8
18 79.70 humidity 70.0 270 > th dose independent rect. 18 7
20 80.27 radiation 20.0 10 < th dose independent rect. 2 19
21 80.33 temperature 30.0 270 < th dose independent rect. 18 7
22 80.33 radiation 1.0 270 < th dose independent rect. 17 8
24 80.35 wind 1.0 270 > th dose independent rect. 13 6
35 80.81 humidity 70.0 270 > th dose independent rect. 24 8
36 80.82 wind 1.0 270 > th dose independent rect. 11 9
37 80.85 radiation 20.0 270 < th dose independent rect. 24 8
44 81.08 radiation 40.0 270 < th dose dependent rect. 24 8
70 81.49 atmosphere 1015.0 270 < th dose independent rect. 24 7
72 81.51 wind 9.0 270 < th dose independent rect. 24 7
73 81.51 temperature 10.0 270 > th dose independent rect. 24 7
75 81.51 temperature 30.0 270 < th dose independent rect. 24 7
76 81.51 humidity 50.0 270 > th dose independent rect. 24 7
78 81.51 atmosphere 995.0 270 > th dose independent rect. 24 7
80 81.51 temperature 10.0 270 > th dose independent rect. 7 17
86 81.68 precipitation 0.1 270 < th dose independent rect. 24 7
88 81.68 precipitation 0.1 270 < th dose dependent rect. 24 7
92 81.74 wind 9.0 270 < th dose independent rect. 13 6
94 81.77 wind 9.0 270 < th dose independent rect. 14 16
97 81.84 radiation 20.0 10 < th dose dependent sin 0 NA
120 82.06 wind 9.0 270 < th dose independent rect. 1 18
125 82.12 temperature 15.0 10 > th dose dependent rect. 16 17
129 82.17 precipitation 0.1 270 < th dose independent rect. 6 8
130 82.17 precipitation 0.1 270 < th dose dependent rect. 6 8
131 82.19 temperature 10.0 270 > th dose independent rect. 13 6
133 82.19 atmosphere 1010.0 270 < th dose independent rect. 13 6
136 82.19 temperature 10.0 270 > th dose independent rect. 19 18
137 82.19 atmosphere 995.0 270 > th dose independent rect. 19 18
151 82.29 radiation 30.0 10 < th dose dependent rect. 2 19
153 82.31 temperature 10.0 270 > th dose independent rect. 6 8
154 82.31 atmosphere 995.0 270 > th dose independent rect. 6 8
155 82.31 atmosphere 1015.0 270 < th dose independent rect. 6 8
156 82.31 temperature 10.0 270 > th dose independent rect. 14 16
158 82.34 wind 9.0 270 < th dose independent rect. 19 18
168 82.42 humidity 50.0 270 > th dose dependent rect. 18 7
169 82.43 temperature 10.0 270 > th dose independent rect. 19 6
172 82.43 atmosphere 995.0 270 > th dose independent rect. 19 6
178 82.43 temperature 10.0 270 > th dose independent rect. 1 18
179 82.43 atmosphere 1015.0 270 < th dose independent rect. 1 18
193 82.48 wind 9.0 270 < th dose independent rect. 19 6
195 82.48 wind 9.0 270 < th dose independent rect. 7 17
196 82.48 temperature 10.0 90 > th dose dependent rect. 15 7
205 82.54 precipitation 0.1 270 < th dose independent rect. 13 6
206 82.54 precipitation 0.1 270 < th dose dependent rect. 13 6
210 82.58 wind 9.0 270 < th dose independent rect. 6 8
215 82.59 precipitation 0.1 270 < th dose independent rect. 14 16
218 82.59 precipitation 0.1 270 < th dose dependent rect. 14 16
222 82.61 radiation 1.0 270 > th dose independent rect. 6 8
225 82.61 radiation 40.0 10 < th dose dependent rect. 14 19
235 82.69 precipitation 0.1 270 < th dose independent rect. 7 17
238 82.69 precipitation 0.1 270 < th dose dependent rect. 7 17
263 82.93 atmosphere 995.0 270 > th dose independent rect. 13 6
267 82.96 wind 1.0 270 > th dose independent rect. 1 18
276 83.03 precipitation 0.1 270 < th dose independent rect. 1 18
278 83.03 precipitation 0.1 270 < th dose dependent rect. 1 18
284 83.11 precipitation 0.1 270 < th dose independent rect. 19 18
285 83.11 precipitation 0.1 270 < th dose dependent rect. 19 18
287 83.14 atmosphere 995.0 270 > th dose independent rect. 1 17
289 83.17 atmosphere 1015.0 270 < th dose independent rect. 14 16
298 83.25 temperature 30.0 270 < th dose independent rect. 7 17
307 83.32 temperature 20.0 10 > th dose dependent rect. 16 15
314 83.34 humidity 90.0 270 < th dose independent rect. 13 6
350 83.55 precipitation 0.1 270 < th dose independent rect. 19 6
351 83.55 precipitation 0.1 270 < th dose dependent rect. 19 6
352 83.55 temperature 10.0 270 > th dose dependent rect. 24 7
363 83.57 radiation 30.0 10 < th dose dependent rect. 13 21
417 83.82 radiation 20.0 30 < th dose independent rect. 12 21
425 83.85 radiation 20.0 10 < th dose independent rect. 2 8
431 83.88 wind 1.0 270 > th dose independent rect. 13 17
434 83.89 atmosphere 995.0 270 > th dose independent rect. 14 16
481 84.05 radiation 30.0 90 < th dose independent rect. 13 8
482 84.05 radiation 40.0 10 < th dose dependent rect. 2 8
504 84.15 wind 1.0 270 > th dose independent rect. 24 7
536 84.26 radiation 1.0 270 > th dose independent rect. 4 10
553 84.27 radiation 1.0 270 < th dose dependent sin 15 NA
562 84.29 radiation 1.0 270 < th dose dependent rect. 6 19
598 84.39 radiation 40.0 270 < th dose independent rect. 14 16
606 84.40 temperature 10.0 10 > th dose dependent rect. 15 7
615 84.44 humidity 50.0 270 > th dose independent rect. 19 18
622 84.45 radiation 10.0 10 > th dose independent rect. 9 7
641 84.50 wind 9.0 90 < th dose dependent rect. 1 8
700 84.70 radiation 10.0 10 < th dose independent sin 0 NA
716 84.77 temperature 10.0 270 > th dose dependent rect. 24 20
744 84.85 atmosphere 995.0 270 > th dose dependent rect. 24 7
750 84.87 temperature 10.0 270 > th dose dependent rect. 1 18
791 85.03 wind 1.0 270 > th dose independent rect. 19 6
797 85.05 humidity 50.0 270 > th dose dependent rect. 24 7
802 85.07 humidity 50.0 270 > th dose independent rect. 20 15
880 85.26 radiation 1.0 270 > th dose independent sin 15 NA
887 85.28 radiation 10.0 10 > th dose independent rect. 7 9
897 85.30 radiation 1.0 270 < th dose independent sin 15 NA
899 85.30 atmosphere 995.0 270 > th dose independent rect. 7 17
915 85.38 temperature 30.0 270 < th dose dependent rect. 18 7
943 85.47 radiation 10.0 270 < th dose dependent rect. 24 14